Transcript_ID function LOC_Os01g15310.1 147 Binds specifically to the 3'-terminal U-tract of U6 snRNA. LOC_Os01g64690.1 104 N/A LOC_Os02g01250.1 132 N/A LOC_Os02g03440.1 141 N/A LOC_Os02g30624.2 101 N/A LOC_Os02g30624.1 101 N/A LOC_Os02g37430.1 114 N/A LOC_Os03g13760.1 132 N/A LOC_Os03g13760.2 92 N/A LOC_Os03g29740.1 80 N/A LOC_Os04g31950.1 97 N/A LOC_Os04g36810.1 129 N/A LOC_Os04g39444.1 114 N/A LOC_Os05g24970.1 106 N/A LOC_Os05g24970.2 105 N/A LOC_Os05g24970.3 72 N/A LOC_Os05g32310.1 89 N/A LOC_Os05g51650.1 141 N/A LOC_Os07g07220.1 261 N/A LOC_Os08g05850 93 Component of LSM protein complexes which are involved in RNA processing. LOC_Os08g08040.1 98 N/A LOC_Os11g43620.1 86 N/A LOC_Os11g43620.2 85 N/A LOC_Os01g34780.1 446 N/A LOC_Os01g34780.2 446 N/A LOC_Os02g16640.1 228 Component of the spliceosomal U1 snRNP which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. LOC_Os02g39300.1 418 N/A LOC_Os03g11200.1 789 N/A LOC_Os03g62640.2 406 N/A LOC_Os03g62640.3 329 N/A LOC_Os03g62640.4 321 N/A LOC_Os03g62640.5 236 N/A LOC_Os05g06280.1 1099 N/A LOC_Os05g06280.2 1036 N/A LOC_Os05g06280.3 312 N/A LOC_Os07g27300.2 348 N/A LOC_Os07g27300.1 348 N/A LOC_Os08g29124.1 1161 N/A LOC_Os10g02630.1 463 N/A LOC_Os02g04480.1 845 N/A LOC_Os02g04950.1 737 N/A LOC_Os02g05310.4 1283 N/A LOC_Os02g05310.1 1283 N/A LOC_Os02g05310.2 1283 N/A LOC_Os02g05310.3 1283 N/A LOC_Os02g05410.1 816 N/A LOC_Os02g13990.1 284 N/A LOC_Os02g13990.2 171 N/A LOC_Os02g13990.3 161 N/A LOC_Os02g14780.2 792 N/A LOC_Os02g14780.1 792 N/A LOC_Os02g27790.1 1206 N/A LOC_Os02g58090.1 582 N/A LOC_Os02g58090.2 227 N/A LOC_Os03g15700.1 321 N/A LOC_Os03g18720.1 232 Involved in nuclear pre-mRNA splicing. LOC_Os03g18720.2 231 N/A LOC_Os03g50850.1 507 N/A LOC_Os03g50850.2 378 N/A LOC_Os03g59710.1 130 N/A LOC_Os04g56760.1 110 N/A LOC_Os05g30410.1 110 N/A LOC_Os08g34480.1 77 N/A LOC_Os10g31900.1 355 N/A LOC_Os01g15860.1 892 N/A LOC_Os01g52470.1 853 N/A LOC_Os01g53900.1 826 N/A LOC_Os02g01740.1 2177 N/A LOC_Os02g32030.1 843 N/A LOC_Os02g33850.1 1005 N/A LOC_Os02g40450.1 1199 DNA helicase required for crossover formation complete synapsis of homologous chromosomes and bivalent formation during meiosis. Is specific to recombination events resulting in interference-sensitive crossovers (class I meiotic crossover) (PubMed:19470578 PubMed:19417775). Works cooperatively with ZIP4 to promote crossovers (PubMed:22393242). LOC_Os03g11470.1 1126 N/A LOC_Os03g44780.1 1029 N/A LOC_Os03g50090.2 736 ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP facilitating the first covalent step of splicing (By similarity). LOC_Os03g50090.4 736 ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP facilitating the first covalent step of splicing (By similarity). LOC_Os03g50090.3 736 ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP facilitating the first covalent step of splicing (By similarity). LOC_Os03g50090.1 736 ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP facilitating the first covalent step of splicing (By similarity). LOC_Os03g53220.1 2144 N/A LOC_Os04g02820.1 843 N/A LOC_Os04g02820.2 843 N/A LOC_Os04g02820.3 651 N/A LOC_Os05g07050.1 2350 N/A LOC_Os06g07080.1 1099 N/A LOC_Os06g40600.1 997 N/A LOC_Os06g44370.1 343 N/A LOC_Os07g10256.1 183 N/A LOC_Os10g34520.1 142 N/A LOC_Os10g35550.1 1039 N/A LOC_Os03g13800.1 128 N/A LOC_Os03g23909 524 N/A LOC_Os03g59700.1 204 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. LOC_Os04g46890 484 N/A LOC_Os07g04850.2 484 N/A LOC_Os07g04850.3 484 N/A LOC_Os07g04850.1 484 N/A LOC_Os09g07500.1 609 N/A LOC_Os09g07500.2 596 N/A LOC_Os09g07500.3 509 N/A LOC_Os02g26349.1 199 N/A LOC_Os02g26349.2 199 N/A LOC_Os02g30730.2 804 N/A LOC_Os02g30730.1 804 N/A LOC_Os03g61640.1 202 N/A LOC_Os09g24250.1 554 N/A LOC_Os03g21020.1 467 N/A LOC_Os04g56770.1 206 N/A LOC_Os09g33870.1 375 N/A LOC_Os09g37720.1 274 N/A LOC_Os05g48960.4 304 Necessary for the splicing of pre-mRNA. LOC_Os05g48960.1 304 Necessary for the splicing of pre-mRNA. LOC_Os05g48960.2 304 Necessary for the splicing of pre-mRNA. LOC_Os05g48960.3 304 Necessary for the splicing of pre-mRNA. LOC_Os11g41820.1 574 Necessary for the splicing of pre-mRNA. LOC_Os11g41820.2 550 N/A LOC_Os11g45590.1 549 N/A LOC_Os11g45590.2 548 Necessary for the splicing of pre-mRNA. LOC_Os11g45590.3 366 N/A LOC_Os01g43170.1 554 N/A LOC_Os01g43170.2 448 N/A LOC_Os01g43170.3 447 N/A LOC_Os08g33830.1 461 N/A LOC_Os08g33830.2 361 N/A LOC_Os01g64770.1 443 N/A LOC_Os01g64770.2 439 N/A LOC_Os01g64770.3 252 N/A LOC_Os01g64770.5 252 N/A LOC_Os05g36120.1 444 N/A LOC_Os05g36120.3 334 N/A LOC_Os05g36120.2 328 N/A LOC_Os04g31620.1 419 N/A LOC_Os01g72650.1 608 N/A LOC_Os03g04520.2 964 N/A LOC_Os03g04520.3 720 N/A LOC_Os03g04520.4 704 N/A LOC_Os03g22570.1 868 N/A LOC_Os03g22570.2 867 Component of the cap-binding complex (CBC) which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary miRNA processing. In the CBC complex ABH1/CBP80 does not bind directly capped RNAs (m7GpppG-capped RNA) but is required to stabilize the movement of the N-terminal loop of CBP20 and lock the CBC into a high affinity cap-binding state with the cap structure (By similarity). LOC_Os02g35150.1 678 N/A LOC_Os02g39890.1 243 Component of the cap-binding complex (CBC) which binds co-transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary miRNA processing. In the CBC complex CBP20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ABH1/CBP80 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. CBP20 also plays a role in stabilization of ABH1/CBP80 and ABH1/CBP80 localization to the nucleus (By similarity). LOC_Os02g39890.2 189 N/A LOC_Os03g22380.1 286 N/A LOC_Os03g22380.2 246 N/A LOC_Os03g22380.3 236 N/A LOC_Os05g30140.1 294 N/A LOC_Os05g30140.2 287 N/A LOC_Os07g47630.1 296 N/A LOC_Os07g47630.2 254 N/A LOC_Os07g47630.8 246 N/A LOC_Os07g47630.7 246 N/A LOC_Os07g47630.6 246 N/A LOC_Os07g47630.4 246 N/A LOC_Os07g47630.3 246 N/A LOC_Os02g39720.2 203 N/A LOC_Os02g39720.3 200 Involved in pre-mRNA splicing. In protoplast assay enhances splicing efficiency of WAXY intron 1 and alters the selection of the 5'-splice sites by stimulating site 1 (proximal site). LOC_Os02g39720.4 200 Involved in pre-mRNA splicing. In protoplast assay enhances splicing efficiency of WAXY intron 1 and alters the selection of the 5'-splice sites by stimulating site 1 (proximal site). LOC_Os02g39720.6 200 Involved in pre-mRNA splicing. In protoplast assay enhances splicing efficiency of WAXY intron 1 and alters the selection of the 5'-splice sites by stimulating site 1 (proximal site). LOC_Os06g08840.3 185 Involved in pre-mRNA splicing. LOC_Os06g08840.1 185 Involved in pre-mRNA splicing. LOC_Os06g08840.2 185 Involved in pre-mRNA splicing. LOC_Os06g08840.4 185 Involved in pre-mRNA splicing. LOC_Os06g08840.5 185 Involved in pre-mRNA splicing. LOC_Os06g08840.6 185 Involved in pre-mRNA splicing. LOC_Os06g08840.7 185 Involved in pre-mRNA splicing. LOC_Os06g08840.8 179 N/A LOC_Os07g43050.1 275 N/A LOC_Os07g43050.3 268 N/A LOC_Os07g43050.2 268 N/A LOC_Os08g37960.1 289 N/A LOC_Os08g37960.2 289 N/A LOC_Os08g37960.3 282 N/A LOC_Os03g25770.1 218 N/A LOC_Os03g25770.2 217 N/A LOC_Os07g43950.1 213 N/A LOC_Os02g03040.1 279 N/A LOC_Os02g03040.2 273 N/A LOC_Os02g03040.3 249 N/A LOC_Os02g03040.4 246 N/A LOC_Os04g02870.1 245 N/A LOC_Os04g02870.2 245 N/A LOC_Os04g02870.4 235 N/A LOC_Os04g02870.3 235 N/A LOC_Os02g15310.1 265 N/A LOC_Os02g15310.2 227 N/A LOC_Os02g15310.3 227 N/A LOC_Os02g15310.4 168 N/A LOC_Os12g38430.1 263 N/A LOC_Os03g24890.1 243 N/A LOC_Os03g24890.2 238 N/A LOC_Os03g17710.1 335 N/A LOC_Os03g17710.2 330 N/A LOC_Os05g02880.1 323 N/A LOC_Os05g07000.1 338 N/A LOC_Os03g19960.1 722 N/A LOC_Os03g19960.2 564 N/A LOC_Os02g08360.1 970 N/A LOC_Os08g01840.1 297 N/A LOC_Os01g34190.1 368 N/A LOC_Os01g62290.1 648 N/A LOC_Os01g62290.2 614 N/A LOC_Os02g02410.1 665 Key chaperone involved in folding of secretory proteins in the endoplasmic reticulum (ER) lumen (Probable). Involved in ER quality control for seed storage proteins during seed maturation (PubMed:19567376 PubMed:21223397). Functions as a sensor of the ER stress response and provides suitable conditions for the production of secretory proteins by alleviating ER stress (PubMed:19567376 PubMed:21223397). LOC_Os03g16860.1 650 N/A LOC_Os03g16860.2 617 N/A LOC_Os03g16880.1 560 N/A LOC_Os03g16920.1 653 N/A LOC_Os03g50250.1 669 Functions as chaperone during endoplasmic reticulum (ER) stress response. LOC_Os03g60620.1 649 N/A LOC_Os05g30480.1 669 Functions as chaperone during endoplasmic reticulum (ER) stress response. LOC_Os05g35400.1 687 Functions as chaperone during endoplasmic reticulum (ER) stress response. LOC_Os05g38530.1 646 N/A LOC_Os08g09770.1 676 Functions as chaperone during endoplasmic reticulum (ER) stress response. LOC_Os11g08440.1 577 N/A LOC_Os11g08445.1 658 N/A LOC_Os11g08460.1 562 N/A LOC_Os11g08460.2 446 N/A LOC_Os11g08470.1 467 N/A LOC_Os11g47760.1 649 N/A LOC_Os11g47760.2 615 N/A LOC_Os11g47760.3 589 N/A LOC_Os11g47760.4 544 N/A LOC_Os11g47760.5 521 N/A LOC_Os11g47760.6 395 N/A LOC_Os01g63890.1 145 N/A LOC_Os04g55290.1 145 N/A LOC_Os04g55290.2 145 N/A LOC_Os04g55290.5 145 N/A LOC_Os04g55290.3 137 N/A LOC_Os04g55290.4 129 N/A LOC_Os05g37390.2 145 N/A LOC_Os05g37390.1 145 N/A LOC_Os05g22260.1 723 N/A LOC_Os05g22260.2 608 N/A LOC_Os06g33250.1 670 N/A LOC_Os02g02890.1 172 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. LOC_Os01g49270.1 711 N/A LOC_Os06g12910.1 801 N/A LOC_Os07g44970.1 931 N/A LOC_Os06g07350.1 482 N/A LOC_Os07g18050.1 486 N/A LOC_Os01g16010.1 256 N/A LOC_Os01g16010.2 256 N/A LOC_Os10g32880.1 497 N/A LOC_Os03g21990.1 472 N/A LOC_Os06g49740.1 340 N/A LOC_Os06g49740.2 268 N/A LOC_Os06g01700.1 230 N/A LOC_Os04g28090.1 972 N/A LOC_Os02g58460.1 516 N/A LOC_Os03g26960.1 1581 N/A LOC_Os02g52250.1 607 N/A LOC_Os06g51420.1 182 N/A LOC_Os08g44520.1 178 N/A LOC_Os08g44520.2 176 N/A LOC_Os08g44520.3 164 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. LOC_Os02g39050.1 311 N/A LOC_Os12g44330.1 927 N/A LOC_Os12g44330.2 927 N/A LOC_Os07g22220.1 555 N/A LOC_Os05g03550.1 1580 N/A LOC_Os06g11170.1 243 N/A LOC_Os06g11170.2 188 N/A LOC_Os01g68760.1 524 N/A LOC_Os03g17010.1 273 N/A LOC_Os03g17010.2 219 N/A LOC_Os03g17010.3 219 N/A LOC_Os11g01020.1 228 N/A LOC_Os11g01020.2 224 N/A LOC_Os12g01010.1 228 N/A LOC_Os01g36890.2 344 N/A LOC_Os01g36920.2 344 N/A LOC_Os08g33120.1 286 N/A LOC_Os08g33120.2 238 N/A LOC_Os08g33120.3 219 N/A LOC_Os08g33120.5 164 N/A LOC_Os03g16369 840 N/A LOC_Os01g72890.1 432 N/A LOC_Os01g72890.2 431 N/A LOC_Os12g18880.1 160 Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export subcellular mRNA localization translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3 thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). EJC core heterodimers play essential roles in plant growth and development and pollen and seed development (PubMed:25230811 PubMed:24820023). The MAGO-Y14 heterodimer selectively binds to the UDT1 (UNDEVELOPED TAPETUM 1) pre-mRNA transcript and regulates the splicing of UDT1 a key regulator in stamen development (PubMed:24820023). LOC_Os01g45190.1 404 ATP-dependent RNA helicase. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export subcellular mRNA localization translation efficiency and nonsense-mediated mRNA decay (NMD). Its RNA-dependent ATPase and RNA-helicase activities are induced by MLN51/CASC3 but abolished in presence of the MAGO-Y14 heterodimer thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The inhibition of ATPase activity by the MAGO-Y14 heterodimer increases the RNA-binding affinity of the EJC (By similarity). EJC core proteins play essential roles in rice development growth and reproduction. Regulates the splicing of UDT1 (UNDEVELOPED TAPETUM 1) pre-mRNA transcript. UDT1 is a key regulator in stamen development (PubMed:27071313). LOC_Os01g45190.3 286 N/A LOC_Os03g36930.1 404 ATP-dependent RNA helicase. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export subcellular mRNA localization translation efficiency and nonsense-mediated mRNA decay (NMD). Its RNA-dependent ATPase and RNA-helicase activities are induced by MLN51/CASC3 but abolished in presence of the MAGO-Y14 heterodimer thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The inhibition of ATPase activity by the MAGO-Y14 heterodimer increases the RNA-binding affinity of the EJC (By similarity). EJC core proteins play essential roles in rice development growth and reproduction. Regulates the splicing of UDT1 (UNDEVELOPED TAPETUM 1) pre-mRNA transcript. UDT1 is a key regulator in stamen development (PubMed:27071313). LOC_Os05g04850.1 204 Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export subcellular mRNA localization translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3 thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). EJC core heterodimers play essential roles in plant growth and development and pollen and seed development (PubMed:25230811 PubMed:24820023). The MAGO-Y14 heterodimer selectively binds to the UDT1 (UNDEVELOPED TAPETUM 1) pre-mRNA transcript and regulates the splicing of UDT1 a key regulator in stamen development (PubMed:24820023). LOC_Os05g04850.2 158 N/A LOC_Os03g49520.1 402 N/A LOC_Os03g49520.2 261 N/A LOC_Os02g19860.1 1240 N/A LOC_Os06g23530.1 1084 N/A LOC_Os07g38420.1 438 N/A LOC_Os03g27970.1 572 N/A LOC_Os08g03390.1 536 Participates in the second catalytic step of pre-mRNA splicing when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. LOC_Os08g03390.2 473 N/A LOC_Os02g21490.1 451 N/A LOC_Os11g20554.1 708 N/A LOC_Os06g09280.1 854 N/A LOC_Os05g32370.1 1151 N/A LOC_Os07g32430.1 1317 N/A LOC_Os08g24760.1 1051 N/A LOC_Os01g01150.2 978 N/A LOC_Os01g01150.3 978 N/A LOC_Os01g01150.1 978 N/A LOC_Os08g05810.1 947 N/A LOC_Os08g06344.2 1049 N/A LOC_Os08g06344.3 1049 N/A LOC_Os08g06344.1 1049 N/A LOC_Os03g15890.1 347 N/A LOC_Os03g15890.2 346 N/A LOC_Os03g15890.3 243 N/A LOC_Os03g19530.1 770 N/A LOC_Os03g51540 407 Cleaves the 2'-5' phosphodiester linkage at the branch point of lariat intron pre-mRNAs after splicing and converts them into linear molecules that are subsequently degraded. It thereby facilitates ribonucleotide turnover. It may also participate in retrovirus replication via an RNA lariat intermediate in cDNA synthesis (By similarity). LOC_Os01g62080.2 434 N/A LOC_Os01g62080.1 434 N/A LOC_Os12g27520.1 423 N/A LOC_Os12g27520.3 290 N/A LOC_Os12g27520.4 290 N/A LOC_Os03g53720.1 556 N/A LOC_Os03g53720.2 409 N/A LOC_Os07g28930.1 543 N/A LOC_Os09g37949.1 421 N/A LOC_Os01g40840.1 388 N/A LOC_Os01g40840.2 310 N/A LOC_Os01g68790.3 150 N/A LOC_Os01g68790.2 150 N/A LOC_Os01g68790.1 114 N/A LOC_Os01g68790.4 72 N/A LOC_Os07g41120.1 501 N/A LOC_Os10g17454.1 317 N/A LOC_Os10g17454.2 317 N/A LOC_Os10g17454.3 300 N/A LOC_Os12g31800.1 258 N/A LOC_Os03g46770.1 162 N/A LOC_Os12g43600.1 162 N/A LOC_Os07g39560.3 472 N/A LOC_Os07g39560.1 472 N/A LOC_Os07g39560.2 472 N/A LOC_Os11g41890.1 467 N/A LOC_Os01g16090.1 490 N/A LOC_Os01g42820.3 447 N/A LOC_Os01g42820.2 447 N/A LOC_Os01g42820.1 447 N/A LOC_Os10g33230.1 464 N/A LOC_Os02g12850.1 397 N/A LOC_Os08g23120.1 350 N/A LOC_Os04g45930.3 774 N/A LOC_Os04g45930.2 774 N/A LOC_Os04g45930.1 774 N/A LOC_Os11g04390.1 501 N/A LOC_Os11g04390.2 361 N/A LOC_Os11g04390.3 252 N/A LOC_Os12g04180.2 502 N/A LOC_Os12g04180.1 502 N/A LOC_Os12g04180.3 502 N/A LOC_Os12g04180.4 502 N/A LOC_Os10g06130.1 472 N/A LOC_Os10g06130.2 472 N/A LOC_Os10g06130.5 438 N/A LOC_Os10g06130.3 438 N/A LOC_Os10g06130.4 438 N/A LOC_Os11g14430.2 480 N/A LOC_Os11g14430.1 465 N/A LOC_Os01g71200.1 460 N/A LOC_Os05g30980.1 466 N/A LOC_Os05g30980.2 442 N/A LOC_Os09g03610.1 738 N/A LOC_Os09g03610.2 738 N/A LOC_Os09g03610.3 732 N/A LOC_Os09g03610.4 727 N/A LOC_Os03g61990.3 205 N/A LOC_Os03g61990.4 205 N/A LOC_Os03g61990.5 205 N/A LOC_Os03g61990.2 205 N/A LOC_Os03g61990.1 205 N/A LOC_Os07g19560.1 394 N/A LOC_Os07g19560.2 360 N/A LOC_Os09g12800.1 479 N/A LOC_Os03g42900.1 510 N/A LOC_Os03g42900.2 389 N/A LOC_Os11g03890.1 298 N/A LOC_Os12g03710.1 251 N/A LOC_Os03g47800.1 308 N/A LOC_Os01g52390.1 380 N/A LOC_Os05g51180.1 383 N/A LOC_Os07g42380.1 427 N/A LOC_Os11g40510.1 441 N/A LOC_Os11g40510.2 403 N/A LOC_Os03g37270.1 406 N/A LOC_Os08g09100.1 434 N/A LOC_Os09g28810.1 345 N/A LOC_Os03g07800.1 416 N/A LOC_Os05g16660.2 326 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex which is involved in protein synthesis of a specialized repertoire of mRNAs and together with other initiation factors stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. LOC_Os05g16660.1 326 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex which is involved in protein synthesis of a specialized repertoire of mRNAs and together with other initiation factors stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. LOC_Os05g16660.3 317 N/A LOC_Os08g21660.1 326 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex which is involved in protein synthesis of a specialized repertoire of mRNAs and together with other initiation factors stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. LOC_Os08g21660.2 315 N/A LOC_Os01g68810.1 1795 N/A LOC_Os02g52820.1 485 N/A LOC_Os07g07250.1 415 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex which is involved in protein synthesis of a specialized repertoire of mRNAs and together with other initiation factors stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. LOC_Os07g12110.1 439 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex which is involved in protein synthesis of a specialized repertoire of mRNAs and together with other initiation factors stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. LOC_Os07g32040.1 436 N/A LOC_Os03g63670.2 955 N/A LOC_Os03g63670.1 955 N/A LOC_Os03g01970.1 638 N/A LOC_Os03g37330.1 430 N/A LOC_Os04g58640.1 202 N/A LOC_Os04g18010.1 509 N/A LOC_Os04g18010.2 400 N/A LOC_Os04g18010.3 265 N/A LOC_Os08g30820.1 226 N/A LOC_Os04g42600.2 659 Binds the poly(A) tail of mRNA. LOC_Os04g42600.1 659 Binds the poly(A) tail of mRNA. LOC_Os08g22354.1 660 Binds the poly(A) tail of mRNA. LOC_Os08g22354.2 645 N/A LOC_Os09g02700.1 662 Binds the poly(A) tail of mRNA. LOC_Os03g17030.1 647 Binds the poly(A) tail of mRNA. LOC_Os01g07740.1 759 N/A LOC_Os01g07740.2 758 N/A LOC_Os01g07740.3 708 ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. LOC_Os01g36860.1 792 ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. LOC_Os01g36860.2 651 N/A LOC_Os01g36860.3 583 N/A LOC_Os11g46240.1 1398 N/A LOC_Os01g10050.2 494 ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. LOC_Os01g10050.1 494 ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. LOC_Os01g68320.2 666 ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. LOC_Os01g68320.1 666 ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. LOC_Os01g68320.4 572 N/A LOC_Os01g68320.5 572 N/A LOC_Os01g68320.3 572 N/A LOC_Os11g07500.1 1003 N/A LOC_Os11g07500.2 970 N/A LOC_Os12g18140.1 776 N/A LOC_Os03g06220.1 505 ATP-dependent RNA helicase essential for mRNA export from the nucleus. Plays an important role in the positive regulation of CBF/DREB transcription factors (By similarity). LOC_Os02g05660.1 627 N/A LOC_Os06g48210.1 619 N/A LOC_Os01g11370.1 700 N/A LOC_Os08g44330.1 651 N/A LOC_Os08g44330.2 513 N/A LOC_Os06g04000.1 160 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. LOC_Os03g10400.2 462 N/A LOC_Os01g40050.2 499 N/A LOC_Os01g40050.1 499 N/A LOC_Os02g39010.1 693 N/A LOC_Os02g39010.2 693 N/A LOC_Os02g39010.3 693 N/A LOC_Os04g41100.4 710 N/A LOC_Os04g41100.5 710 N/A LOC_Os04g41100.3 710 N/A LOC_Os04g41100.2 710 N/A LOC_Os04g41100.1 710 N/A LOC_Os04g41100.6 559 N/A LOC_Os03g05830.1 595 N/A LOC_Os10g30370.1 339 N/A LOC_Os10g30370.2 320 N/A LOC_Os03g25970.1 542 N/A LOC_Os03g25970.2 542 N/A LOC_Os02g07070.1 1000 N/A LOC_Os02g07070.2 889 N/A LOC_Os02g07070.3 887 N/A LOC_Os03g06190.1 600 N/A LOC_Os10g30100.1 902 N/A LOC_Os02g49530.2 135 N/A LOC_Os02g49530.1 135 N/A LOC_Os01g49290.1 334 Component of the RACK1 regulatory proteins that functions in innate immunity by interacting with multiple proteins in the RAC1 immune complex. Acts as positive regulator of reactive oxygen species (ROS) production and is required for resistance against rice blast (M.grisea) infection. LOC_Os03g26630.1 715 N/A LOC_Os03g26630.2 715 N/A LOC_Os01g21940.1 517 N/A LOC_Os01g62040.1 455 N/A LOC_Os01g62040.2 339 N/A LOC_Os01g62040.3 198 N/A LOC_Os07g08170.1 455 N/A LOC_Os02g41820.1 236 N/A LOC_Os11g04880.1 73 N/A LOC_Os11g05394.1 392 N/A LOC_Os11g05394.2 257 N/A LOC_Os12g15420.1 787 N/A LOC_Os10g34380.1 1078 N/A LOC_Os06g30710.3 504 N/A LOC_Os06g30710.1 504 N/A LOC_Os06g30710.2 504 N/A LOC_Os09g10930.2 431 N/A LOC_Os09g10930.1 431 N/A LOC_Os03g17170.1 305 N/A LOC_Os12g42140.1 844 N/A LOC_Os06g08770.1 476 N/A LOC_Os07g06450.1 348 N/A LOC_Os07g08729.1 624 Single-stranded DNA-dependent ATP-dependent helicase. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair. When associated with KU70 binds to double-stranded telomeric and non-telomeric DNA sequences but not to single-stranded DNA (By similarity). Required for the maintenance of chromosome stability and normal developmental growth. Plays a role in maintaining telomere length. Acts as a negative regulator in telomere homeostasis. LOC_Os02g19804.1 326 N/A LOC_Os02g17870.1 435 N/A LOC_Os02g33860.1 301 N/A LOC_Os07g32890.1 987 N/A LOC_Os11g04950.1 567 N/A LOC_Os12g04940.1 536 N/A LOC_Os06g30020.1 542 N/A LOC_Os01g40610.1 330 N/A LOC_Os03g58590.1 672 N/A LOC_Os01g46710.1 1350 N/A LOC_Os03g04400.1 296 N/A LOC_Os06g29400.1 984 Functions as component of microRNA (miRNA) and small interfering RNA (siRNA) biogenesis. May assist Dicer-like (DCL) proteins to efficiently process and/or recruit the precursors of miRNAs and siRNAs. LOC_Os08g08080.1 552 N/A LOC_Os08g08080.2 441 N/A LOC_Os03g15480.1 298 N/A LOC_Os03g61220.1 758 Nuclear genome-encoded factor involved in ribosome biogenesis in chloroplasts. Binds specific group II introns in chloroplasts and facilitates their splicing. Required for normal development of chloroplasts. LOC_Os03g61220.2 757 N/A LOC_Os08g32090.1 851 N/A LOC_Os02g42860.1 508 ATP-dependent RNA helicase involved in mRNA turnover and more specifically in mRNA decapping. LOC_Os04g45040.3 498 ATP-dependent RNA helicase involved in mRNA turnover and more specifically in mRNA decapping. LOC_Os04g45040.2 498 ATP-dependent RNA helicase involved in mRNA turnover and more specifically in mRNA decapping. LOC_Os04g45040.1 498 ATP-dependent RNA helicase involved in mRNA turnover and more specifically in mRNA decapping. LOC_Os10g35990.2 474 N/A LOC_Os10g35990.1 470 N/A LOC_Os03g46610.1 472 N/A LOC_Os03g46610.2 468 N/A LOC_Os02g50560.1 1179 N/A LOC_Os02g50560.2 1069 N/A LOC_Os03g59050.1 637 N/A LOC_Os07g10250.1 638 N/A LOC_Os11g38670.1 623 N/A LOC_Os07g45360.1 540 N/A LOC_Os02g06500.1 773 N/A LOC_Os02g10770.2 536 N/A LOC_Os07g43980.1 501 N/A LOC_Os06g40020.1 478 N/A LOC_Os02g12840.1 881 N/A LOC_Os10g35220.1 762 N/A LOC_Os10g35220.2 677 N/A LOC_Os09g32300.1 616 N/A LOC_Os09g32300.2 398 N/A LOC_Os09g32300.3 398 N/A LOC_Os05g40290.1 282 N/A LOC_Os05g40290.2 281 N/A LOC_Os05g40290.3 233 N/A LOC_Os12g40560.1 517 N/A LOC_Os12g40560.2 355 N/A LOC_Os01g60260.2 283 N/A LOC_Os01g60260.1 283 N/A LOC_Os03g60110.1 281 Involved in flowering time control. Binds DNA and RNA in vitro. LOC_Os08g40880.1 447 N/A LOC_Os10g41440.1 458 N/A LOC_Os07g05050.1 602 N/A LOC_Os07g05050.2 585 N/A LOC_Os07g05050.3 330 N/A LOC_Os12g41715.1 628 N/A LOC_Os06g38980.1 670 N/A LOC_Os09g34910.1 696 N/A LOC_Os07g20580.1 512 ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing predominantly at site A3 which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity). LOC_Os02g48340.1 296 N/A LOC_Os02g48340.2 288 N/A LOC_Os02g48340.3 287 N/A LOC_Os02g48340.5 287 N/A LOC_Os02g48340.6 181 N/A LOC_Os06g41790.1 275 N/A LOC_Os04g54440.3 515 N/A LOC_Os04g54440.2 515 N/A LOC_Os04g54440.1 515 N/A LOC_Os07g33330.1 489 N/A LOC_Os03g25960.1 265 N/A LOC_Os04g37690.1 387 N/A LOC_Os04g53440.1 460 N/A LOC_Os04g53440.2 425 N/A LOC_Os07g43810.1 264 N/A LOC_Os08g44290.1 305 N/A LOC_Os07g46820.1 427 N/A LOC_Os07g46820.2 425 N/A LOC_Os07g46820.3 414 N/A LOC_Os07g08320.1 650 N/A LOC_Os01g06290.1 324 N/A LOC_Os01g06290.2 324 N/A LOC_Os01g06290.3 276 N/A LOC_Os01g06290.4 208 N/A LOC_Os03g49430.1 501 N/A LOC_Os03g49430.4 375 N/A LOC_Os03g49430.3 320 N/A LOC_Os02g49080.1 286 N/A LOC_Os09g31482.1 290 Necessary for the splicing of pre-mRNA. LOC_Os09g31482.3 290 Necessary for the splicing of pre-mRNA. LOC_Os06g50890.1 315 N/A LOC_Os02g13130.1 699 N/A LOC_Os02g13130.2 346 N/A LOC_Os02g13130.3 346 N/A LOC_Os07g08190.1 632 N/A LOC_Os09g39780.2 179 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. LOC_Os09g39780.1 179 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. LOC_Os07g10390.1 955 N/A LOC_Os09g01630.1 392 N/A LOC_Os09g01630.2 243 N/A LOC_Os03g22730.1 568 N/A LOC_Os03g22740.1 568 N/A LOC_Os01g07070.2 499 N/A LOC_Os01g07070.4 499 N/A LOC_Os01g07070.3 499 N/A LOC_Os01g07070.1 499 N/A LOC_Os05g51480.1 1090 Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (Probable). May function as the substrate recognition module for a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex (By similarity). LOC_Os05g51480.2 1000 N/A LOC_Os07g12490.1 286 N/A LOC_Os07g12490.2 241 N/A LOC_Os09g39180.1 322 N/A LOC_Os04g33810.1 137 N/A LOC_Os02g53230.1 1027 N/A LOC_Os06g10620.1 759 N/A LOC_Os03g36780.1 757 Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites respectively. Catalyzes the coordinated movement of the two tRNA molecules the mRNA and conformational changes in the ribosome. LOC_Os01g66300.1 290 N/A LOC_Os05g34670.1 291 N/A LOC_Os04g45490.1 684 N/A LOC_Os01g14990.1 175 N/A