Effector profile
PlantPEAD ID: PlantPEAD00002 Uniprot ID: C7FGN4 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 97005 Pathogen type: Nematoda
Species: Heterodera schachtii Strain: Other name: Sugarbeet cyst nematode, Tylenchus schachtii
Gene name: 10A06 NCBI Gene ID: GQ373258
Entry name: C7FGN4_HETSC Protein name: 10A06 effector protein isoform 3
DOI: 10.1104/pp.109.150557
Gene/Protein information
Gene sequence:
ATGCTGAGGATTGCTCTACTCATCTCCATTTTGGCACTGTTTGGTGATTGCATGGACAAGGGAAAAAGAAAATTAGGAGGAATAAGTATTAATGAGCCAAGTGAATATGGAACCAAAGAAAAAGAAGCCATCGCAACAAAAGAAAATGCACAAACATCAAAGGACCCGCCGACATCGGCGGGTGGTCAAAATGAAGCAATCCCTTCACCAAAAAAGCCAAGCCCCAAGGGGAAGTTGAAAAGCGATTTTGGCCTAAACTTAGCCAAGGCTTTTCCACGGCCGGTTCCGAAAGAGAAAAATGAAGAAAATGCACAGACCTCAAAGGTCCCGACATCGATGGAAGGGCAAAATGAACCAATCCCTTCACCAAAAAAGTCAAGCCCCAAGGGGAAGTCCAAAAGCGATTTCGCCCTAAACTTGGCCAAAGCTTTTCCACGACCGGTGCCGAAAGCAAAAATGGGAGAAGAAGCTCAGTCTTCAAAAGATCCGACAATGAATGGCCAAATTTGTGCAATTTGTTTGGATGCATCGCCTATCACTGACCTTGAATTGAGCAAATGCCATCATCGCTTTCACCGCGAATGCGTTGATGGGTGGTTTAAAAACAATGACACGTGCCCTTATTGTCGTGCTGTAGTTGCAAGCAGATATTTACCAAGACCTACGCGTACAGATCGAATTTTTGACGCCAGAATCGAAAACAAAAGACGCTTCATGGGAGAAGGAGAAGGAAAATACACAATTATTCGCCCTAACGGAAGTACGCTTATGGTTCACGATAATCATTTTGGAAACAATTTTACGGTCGAAAAAACTGAAGAGGGCTCCATTCAACTCAGTAAAAACGATCGCAAATAG
Protein sequence:
MLRIALLISILALFGDCMDKGKRKLGGISINEPSEYGTKEKEAIATKENAQTSKDPPTSAGGQNEAIPSPKKPSPKGKLKSDFGLNLAKAFPRPVPKEKNEENAQTSKVPTSMEGQNEPIPSPKKSSPKGKSKSDFALNLAKAFPRPVPKAKMGEEAQSSKDPTMNGQICAICLDASPITDLELSKCHHRFHRECVDGWFKNNDTCPYCRAVVASRYLPRPTRTDRIFDARIENKRRFMGEGEGKYTIIRPNGSTLMVHDNHFGNNFTVEKTEEGSIQLSKNDRK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
31501.9 285 9.38 -0.817 42.71
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Beta vulgaris Disease name: Sugarbeet cyst
Host classification: Eudicots NCBI Species: 161934
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
O48661
Spermidine synthase 2
SPDSYN2
Arabidopsis thaliana (related: thale cress)
MSSTQEASVTDLPVKRPREAEEDNNGGAMETENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGPAKELFEKPFFESVNRALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLCSSEGPQVDFKKPVSLIDTDESSIKSHCPLKYYNAEIHSAAFCLPSFAKKVIDSKAN