Effector profile
| PlantPEAD ID: PlantPEAD00005 | Uniprot ID: B0FGT7 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 97005 | Pathogen type: Nematoda |
| Species: Heterodera schachtii | Strain: | Other name: Sugarbeet cyst nematode, Tylenchus schachtii |
| Gene name: CBP | NCBI Gene ID: EU328302 | |
| Entry name: B0FGT7_HETSC | Protein name: Cellulose binding protein | |
| DOI: 10.1105/tpc.108.063065 | ||
Gene/Protein information
Gene sequence:
ATGAATTGGATGCATTATTGTTTAATCGCTTGCTTTTCCATTTATTATTTCAATACTGTTGAGTCATCCACTATTAATTCGGTAACCGTACAAGTGAACAAGATTGAAAACAATGAAAAAGGAAGACAATTCAATTTGAAATTTACAAACCAAGTTTATGAACGAGTGTGCCACGTCGACTTTCGGGTTGATCTGCCAGACACGGCAAAATTGGACAAATATTCAAAAATGGTGCCAATTCCTGACACCTGTGGCCAATACGCATTGCCCAAGAGTTTGGACTTGCTTCCCGGCGAGACATTTGATGCACAACTAACACTGCTTGGCCATGATGGGAAGCCGAATGTGACTGTGCTGAACACGAACAATATTCCAACCAGCAAACAATGCAAAAAATGAAAAAGCCTACCCAATTAAAATGCAAAAAATGAACAAGCCTACCCAATTAAGCTAATTGCCCTA
Protein sequence:
MNWMHYCLIACFSIYYFNTVESSTINSVTVQVNKIENNEKGRQFNLKFTNQVYERVCHVDFRVDLPDTAKLDKYSKMVPIPDTCGQYALPKSLDLLPGETFDAQLTLLGHDGKPNVTVLNTNNIPTSKQCKK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15068.3 | 132 | 7.62 | -0.369 | 32.26 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Beta vulgaris | Disease name: Sugarbeet cyst |
| Host classification: Eudicots | NCBI Species: 161934 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
O49006
|
Pectinesterase/pectinesterase inhibitor 3
|
PME3
|
Arabidopsis thaliana (related: thale cress)
|
MAPSMKEIFSKDNFKKNKKLVLLSAAVALLFVAAVAGISAGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: