Effector profile
PlantPEAD ID: PlantPEAD00009 | Uniprot ID: G3XCJ2 | Source: Article |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
Species: Pseudomonas syringae | Strain: pv. tomato strain DC3000 | Other name: Pseudomonas syringae tomato |
Gene name: HopPtoG | NCBI Gene ID: AY208296 | |
Entry name: G3XCJ2_PSEUB | Protein name: HopPtoG | |
DOI: 10.1073/pnas.112183899 |
Gene/Protein information
Gene sequence:
ATGCAAATAAAGAACAGTCATCTCTATTCAGCTTCAAGAATGGTGCAGAATACTTTTAATGCCTCGCCTAAGATGGAAGTAACTAATGCAATAGCAAAAAATAATGAACCTGCTGCGCTGAGCGCTACGCAAACTGCAAAGACACACGAAGGCGATTCAAAAGGCCAATCCAGCAATAACTCTAAATTGCCCTTCCGCGCCATGAGGTACGCTGCATACCTTGCAGGCAGCGCCTACCTCTACGATAAAACTGCCAATAATTTTTTTCTTTCTACCACTTCTCTGCATGATGGCAAAGGTGGTTTTACCAGCGATGCCAGGCTTAACGATGCACAAGATAAAGCGCGAAAGCGCTACCAAAACAACCATAGCAGCACTCTTGAAAATAAAAACTCGCTTTTAAGCCCGCTTAGGCTTTGCGGAGAGAATCAGTTCTTAACGATGATTGATTATCGTGCAGCAACTAAGATTTACCTCTCCGACCTAGTTGACACGGAGCAAGCGCACACATCAATTCTGAAGAATATTATGTGCCTGAAAGGTGAGCTTACCAATGAAGAGGCAATAAAAAAACTCAACCCGGAAAAAACACCAAAAGACTATGACCTTACAAATAGCGAAGCCTATATAAGCAAGAACAAATATTCTTTGACCGGCGTTAAAAATGAGGAGACGGGATCTACTGGTTATACATCTCGTTCTATCACAAAGCCATTTGTGGAAAAAGGCCTGAAACACTTTATAAAAGCGACTCATGGCGAAAAAGCTCTCACGCCCAAGCAGTGTATGGAAACTCTTGATAACTTACTTCGAAAAAGTATCACGCTCAACAGTGATTCCCAATTCGCAGCAGGCCAGGCACTTTTGGTTTTCAGACAGGTCTATGCGGGTGAAGACGCTTGGGGGGATGCGGAACGGGTCATATTGAAAAGCCATTATAATCGGGGCACTGTACTCCAAGATGAAGCTGATAAAATAGAACTAAGTAGGCCGTTCTCAGAGCAAGATTTAGCAAAGAACATGTTTAAGAGGAATACCAGCATTGCAGGGCCAGTGCTCTACCACGCATATATTTATATACAAGAAAAAATCTTCAAGCTACCCCCCGACAAAATAGAAGATTTGAAACATAAATCAATGGCAGACTTGAAAAACCTGCCTTTGACTCATGTTAAGCTTAGCAATTCCGGTGTGGGATTTGAAGACGCCTCAGGGTTAGGAGACTCGTTTACAGCTCTCAACGCGACGTCCTGTGTTAATCACGCAAGAATAATGAGTGGTGAGCCTCCCTTGTCAAAAGATGATGTTGTGATTCTGATAGGTTGCCTCAACGCCGTATACGACAATTCGAGCGGAATAAGGCATTCTCTCCGCGAAATTGCACGAGGGTGCTTTGTGGGTGCTGGTTTTACGGTCCAGGACGGTGACGACTTCTACAAACAGATCTGCAAAAACGCCTCTAAGCAGTTTTACAACGGCTAA
Protein sequence:
MQIKNSHLYSASRMVQNTFNASPKMEVTNAIAKNNEPAALSATQTAKTHEGDSKGQSSNNSKLPFRAMRYAAYLAGSAYLYDKTANNFFLSTTSLHDGKGGFTSDARLNDAQDKARKRYQNNHSSTLENKNSLLSPLRLCGENQFLTMIDYRAATKIYLSDLVDTEQAHTSILKNIMCLKGELTNEEAIKKLNPEKTPKDYDLTNSEAYISKNKYSLTGVKNEETGSTGYTSRSITKPFVEKGLKHFIKATHGEKALTPKQCMETLDNLLRKSITLNSDSQFAAGQALLVFRQVYAGEDAWGDAERVILKSHYNRGTVLQDEADKIELSRPFSEQDLAKNMFKRNTSIAGPVLYHAYIYIQEKIFKLPPDKIEDLKHKSMADLKNLPLTHVKLSNSGVGFEDASGLGDSFTALNATSCVNHARIMSGEPPLSKDDVVILIGCLNAVYDNSSGIRHSLREIARGCFVGAGFTVQDGDDFYKQICKNASKQFYNG
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
54664.6 | 493 | 8.76 | -0.535 | 34.87 |
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress) | |
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|---|---|---|---|
Q8W5R5
|
Kinesin-like protein KIN-7D, mitochondrial
|
KIN7D
|
Arabidopsis thaliana (related: thale cress)
|
MASSSSRTRSSRPPSPASSTSSSHLSNRLIPRSNSTSASSLITSAAGIASRSMTPSRTFSDSGLIGSGSFGIGSPVPYPSEELLGDPMDDTISSERDSISVTVRFRPLSDREYQRGDEVAWYPDGDTLVRHEYNPLTAYAFDKVFGPQATTIDVYDVAARPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQESPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDSQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLLSSRSHTIFTLMVESSATGDEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKATHIPYRDSKLTRLLQSSLSGHGHVSLICTITPASSSSEETHNTLKFASRAKSIEIYASRNQIIDEKSLIKKYQREISTLKLELDQLRRGMLVGVSHEELMSLKQQLEEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYSGDIPTHQRSLSAGKDDKFDSLLLESDNLGSPSSTLALLSEGSLGFNHRRSSSKLNDENSPGAEFTQGVMTPDEIDLLVEQVKMLAGEIAFSTSTLKRLVDQSVNDPENSQTQIQNLEREIHEKQRQMRGLEQLIIESGEASIANASLVEMQQKVMSLMTQCNEKSFELEIKSADNCILQEQLQEKCTENKELHEKVNLLEQRLNAVSSEKSSPSCSNKAVSGEYADELKKKIQSQEIENEELKLEHVQIVEENSGLRVQNQKLAEEASYAKELASAAAVELKNLASEVTKLSLQNTKLEKELAAARDLAQTRNPMNGVNRKYNDGARSGRKGRISSSRSSGDEFDAWNLDPEDLKMELQVRKQREVALESALAEKEFIEDEYRKKAEEAKRREEALENDLANMWVLVAKLKKDNGALPEPNGTDPGRELEKSQSHAVLKERQVSSAPRQPEVVVVAKTEETPKEEPLVARLKARMQEMKEKEMKSQANGDANSHICKVCFESPTAAILLPCRHFCLCKSCSLACSECPICRTKISDRLFAFPS
|
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: