Effector profile
| PlantPEAD ID: PlantPEAD00010 | Uniprot ID: Q5G7L3 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 123356 | Pathogen type: Oomycota |
| Species: Hyaloperonospora parasitica | Strain: strain Maks9 | Other name: Peronospora parasitica |
| Gene name: Atr13 | NCBI Gene ID: AY785301 | |
| Entry name: Q5G7L3_9STRA | Protein name: Avirulence protein ATR13 | |
| DOI: 10.1126/science.1104022 | ||
Gene/Protein information
Gene sequence:
TTGTATCTGGGTACTTGCGGAACTGCATACTATAGCACACGCACGTTCGGTTCACCTCCCACTAATTATCCAGCACTAGACCACGGCAAGCACGTGTCCAATGCAGAGATCGGACGGCACGCTGGACGAACAACGCACCGTGTTTTTCAAAGGCCGAACTTCATGTCATTTCCGCATTCGCCTTTCAAGAATCACCTCCCGAGTCCCCCATCTGAACAATGCGCCTTGTTCACGCGGTACTGCTACCTGGCATTATTGTCTTCGTATCCAACGGGAATCTGCTCCACGCCCATGCGCTCCATGAGGACGAGACGGGTGTCACTGCTGGTCGCCAGCTCCGAGCAGCCGCCAGCGAAGTATTTGGACTCTCACGAGCTAGTTTCGGGCTTGGTAAGGCTCAAGATCCGCTCGACAAGTTCTTTAGGAAGATAATAAACTCGCGGAAGCCCATCGAAACCAGTTATTCGGCTAAAGGCATCCACGAGAAGATTATAAAGGCATACGATCGTCATGTCTTCGAATCTAAGAAGGCACACGATCGTCATGTCTCCAAATCTAAGAAGGCACACGGTCGTCATGTCTCCAAATCTAAGATGGCACACGATCGTCATGTCTCCAAATCTGAGAAGGCCCCCATCCAGTATGCCAGTGTAATGGAATACCTGAAAAAAACCTACCCCGGTCCGCACATTGAACGTATTGTCTCGACGCTCGAGCGTCACGACGAAGTAGGAGCTAAAGATTTGGGAGCGAAACTTCGGGCTGCCCTTGACAGACAGTAG
Protein sequence:
MRLVHAVLLPGIIVFVSNGNLLHAHALHEDETGVTAGRQLRAAASEVFGLSRASFGLGKAQDPLDKFFRKIINSRKPIETSYSAKGIHEKIIKAYDRHVFESKKAHDRHVSKSKKAHGRHVSKSKMAHDRHVSKSEKAPIQYASVMEYLKKTYPGPHIERIVSTLERHDEVGAKDLGAKLRAALDRQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20910.1 | 187 | 10.02 | -0.524 | 27.62 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q9M667
|
Disease resistance protein RPP13
|
RPP13
|
Arabidopsis thaliana (related: thale cress)
|
MVDAITEFVVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEAREREDEVSKEWSKLVLDFAYDVEDVLDTYHLKLEERSQRRGLRRLTNKIGRKMDAYSIVDDIRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSVDQEEVVVGLEDDAKILLEKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTGDILMRIIRSLGMTSGEELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDIWEREAWDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFEQRAFRNIQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKTPSEWNDVCNSLWRRLKDDSIHVAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMEDVARYYIEELIDRSLLEAVRRERGKVMSCRIHDLLRDVAIKKSKELNFVNVYNDHVAQHSSTTCRREVVHHQFKRYSSEKRKNKRMRSFLYFGEFDHLVGLDFETLKLLRVLDFGSLWLPFKINGDLIHLRYLGIDGNSINDFDIAAIISKLRFLQTLFVSDNYFIEETIDLRKLTSLRHVIGNFFGGLLIGDVANLQTLTSISFDSWNKLKPELLINLRDLGISEMSRSKERRVHVSWASLTKLESLRVLKLATPTEVHLSLESEEAVRSMDVISRSLESVTLVGITFEEDPMPFLQKMPRLEDLILLSCNYSGKMSVSEQGFGRLRKLDLLMRSLDELQIEEEAMPNLIELEISVSKRETKLIIPNRLRAFGQIYC
|
External Links
Interpro: IPR031791,IPR038525
Pfam: PF16829
SMART:
KEGG:
PRINTS: