Effector profile
PlantPEAD ID: PlantPEAD00014 Uniprot ID: Q258K5 Source: Article
Localization: Apoplastic(Exp) Pathogen taxonomy ID: 5022 Pathogen type: Fungi
Species: Leptosphaeria maculans Strain: strain v23.1.3 Other name: Phoma lingam
Gene name: AvrLm1 NCBI Gene ID: AM084345
Entry name: Q258K5_LEPMC Protein name: AvrLm1 protein
DOI: 10.1111/j.1365-2958.2006.05076.x; 10.1016/j.isci.2018.04.015
Gene/Protein information
Gene sequence:
ATCTCCTAATCCATTCCTCACCTCGTGGTCACCTAGTTTAAATAGTCATATTTCTCTATATCTTACACAACGCACTCTATACACACTCTACACACCACCTTAGCAATCTCCTTGTTAAAGACAATTACCAACATGGTTCAATTCAAGACTATCTTTCTATCAACAGCTCTTGCAGCTCTCTTTTCAACAGGTTCTAGCTCCCCAGCTACCAAGAACAATGTGAATCAACCTCTGGACAATATTTCCAGACGTTCCGAGTGGAAATCCGTCCAGATAAGCCCTGTAAAAGAACACTCGGCCAAAACAGCAGATAATACTGAAAATAACCACAACCTGGAGAAGCGGGTGTTTACTTCGCCTCACATGAAACGGACCTTCACACTAGCGCTGGAGAATACCTTCTACGCTATGGCCTGGCTGATAGACTTCAGCTTTAGCGATGATGGCGAACCCCACTTCAGCTATAAACTGCAGTCGTTTAATCACGAAGACAACCCACCTAAAATATTAGCCGATGTCGTGGTTCCGCTCATTACAACGTCCTACAACAGCGCAAATCAGTATCGCGGCAAAGCGAATGTTGAACTTCTTTGTCATCTAGCAAAGGAATACGTCCATGTCTATTTTAGTGTGGAAGTCTTTGCCTCTGGTGCATCATTCGTGATTGGCAAAATCATTGATTATCCTACAGTTTACGTTAATAATCAATTTAGGAAGGTTGTAAAATTTGATATTGCGGGTGCAATATAA
Protein sequence:
MVQFKTIFLSTALAALFSTGSSSPATKNNVNQPLDNISRRSEWKSVQISPVKEHSAKTADNTENNHNLEKRVFTSPHMKRTFTLALENTFYAMAWLIDFSFSDDGEPHFSYKLQSFNHEDNPPKILADVVVPLITTSYNSANQYRGKANVELLCHLAKEYVHVYFSVEVFASGASFVIGKIIDYPTVYVNNQFRKVVKFDIAGAI
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
23107.2 205 7.85 -0.207 38.63
Plant infestation information
Experimental plant: Brassica napus (related: rape)
Susceptible plant: Brassica napus Disease name: Phoma stem canker
Host classification: Eudicots NCBI Species: 3708
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9LV37
Mitogen-activated protein kinase 9
MPK9
Arabidopsis thaliana (related: thale cress)
MDPHKKVALETEFFTEYGEASRYQIQEVIGKGSYGVVASAIDTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHVMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANSDCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDIMTDLLGTPPPEAIARIRNEKARRYLGNMRRKPPVPFTHKFPHVDPLALRLLHRLLAFDPKDRPSAEEALADPYFYGLANVDREPSTQPIPKLEFEFERRKITKEDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEENYGKGEKGSPLQRQHASLPRERVPAPKKENGSHNHDIENRSIASLVTTLESPPTSQHEGSDYRNGTSQTGYSARSLLKSASISASKCIGMKPRNKSEYGESNNDTVDALSQKVAALHT