Effector profile
| PlantPEAD ID: PlantPEAD00035 | Uniprot ID: Q52420 | Source: Article |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 321 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain Pss61 | Other name: |
| Gene name: HrpA1 | NCBI Gene ID: L41863 | |
| Entry name: HRPA_PSESY | Protein name: Hrp pili protein HrpA | |
| DOI: 10.1111/j.1365-2958.2006.05350.x | ||
Gene/Protein information
Gene sequence:
ATGACTATCATGAGTTCTCTGGCGGGTGCAGGTCGCGGTGTCGTCAACACGATCGGTGGTGCCGCTCAGGGCATCAACAGCGTAAAGAGCAGCGCCGACCGTAATGCTGCACTGGTGAGCAACACCGGCAGCACTGACAGTATCGACGCGACCCGTTCCAGCATCAGCAAAGGCGATGCAAAAAGTGCCGAGCTTGACGGTACCGCGAACGAAGAGAACGGCCTGCTGCGCGAATCGAGCATGCTGGCGGGCTTTGAGGACAAGAAAGAGGCGCTTTCCAACCAGATCGTCGCAAGCAAGATCCGGAACTCGGTCGTCCAGTTCTGA
Protein sequence:
MTIMSSLAGAGRGVVNTIGGAAQGINSVKSSADRNAALVSNTGSTDSIDATRSSISKGDAKSAELDGTANEENGLLRESSMLAGFEDKKEALSNQIVASKIRNSVVQF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 11006.2 | 108 | 5.33 | -0.228 | 24.52 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Brown spot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: