Effector profile
PlantPEAD ID: PlantPEAD00036 | Uniprot ID: Q4ZX50 | Source: Article |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
Gene name: HrpK1 | NCBI Gene ID: CP000075 | |
Entry name: Q4ZX50_PSEU2 | Protein name: Type III helper protein HrpK1 | |
DOI: 10.1111/j.1365-2958.2006.05350.x |
Gene/Protein information
Gene sequence:
ATGGCAACCATGCGTATATCCAGTTCTCCCAGTCCTGCCCTTGGCAGCATCGTGAATCAACCCACCTCTGGCGAACTGGCTGCCGAGACGCCATTGGCCAAAGCCTCGCTTACGCAGGGCAGCGCAGGTGGTGGTCAGGCGTTTGTGCAGTTCGGCCAGGCCAACGACAGCCCCTCTTCCTTTTCAGGAACCGAGCAAAACGGCTCATCGCTGATGAGTCTGCTGACTCGCAGCAGCAGTAGTGACAGCACCTCCAGCGTCGATCAGGACAGTGAGGTGTCTCCGATGACATCGGTCTCGTCTACCGCGAGTGCGTCACCCACGACGGCCTCCAATCCGGCGAATGCCCCGAGCGCTACCGATGCAGCGTTTCTCGATAACTCCGAATACTCTTCGCCCGAGGCGCTCAAGCGCTGGGAACCGATGGTTGCCAACCTGCCGCCCGAAGAGCGCGAACAAGCCGCCAAAGAACTCAACCGGCCCATCGCCGCAGCGTGGATGGCCAGAGAGGATGGTCCCAACGCCGAAAAGGCGATGGCGTTCATCAATGCCAATCCCGCGTTGAAGACGGCGGTCGACGTCGGCAAGGACGGCGGTAATGCGGATGGCAAAATCACCAACAAAGACCTCAAGGCGTTCGCCAAAAACATGGAGAAGGCTGCCGACAATGCCGACAAGGACGTGGCCAAGTACATGGAAGATAACCCCGGCGCCGATCCTCAGTCCCTTGAAATGGTGCGCAGCGCAGCGGTGATGCGCGCCAATATGCCGTTGGCGACGGCTGCCGACCCTCATCATGCAGTCGGAGCGGCGGACAAGACCGATGTCGATGGCAATGTCAGCGCCGAGGGTCTGAAAGCGCTGATTAAAAGTAACCCCGGGTTGTCAGGTACGCTCAAACAGTCGTCCAACATGTGGTCGCAGGCGGGCTTCCTCAGCCAGGTGGATGAAGCCGGTCTGACCGGGCGCAAGAAGGCTGCGCATAGCCCCGACCAAGTGTTCGATGCGTCCAATATGAGCGAGTGGATCAGAAAGAGCGCCCCCAAAAATGGTGGCCAGTTCGCCAGCATGCTCAGCGACGCCGCGACGTTGAATTCGGTAGCCGGTATCGATATCAGCAAGCTCAACGCGCAGGTGTTCGAGAAGCCCAAGGCTTACACCGGCGCGCAGAAAGCCGCTGTGATGATCAAGTTGCAGCAGACTCAGCAAAGCGTGATAGCCGGGCGGGATTTGCGCAATACCGAGAAGACCGAGGCGGGCCTTAACGAGCGAATCGCCCAGTTGCAAGCCGATCCCGACGTTCAGGAGTACCTCAACAAAAGCATTCCTGAACAGGAGCGCAGTCTGGTTCGCAGCGATTCAGCGCTGCAAAAGGCCGTGACTGAGCAGGCTCAAAACGTCAATAGCGGAAAGGCCTTGCAAACCGACATGGCAACCGCGGACAAGGCCGTCGACAAACACAACCCCAACCCCGATTACAGCGGCGCCATCACCGGCCTGTCGGTTCAACTGCAACTGCAAAAAGACCTTTTTCCCGATGCTCAGGTGCCCACTGCCCAGCAAGTCTTCAACAACCAGCCTGATGAACTGCAAACGAAGATCGCCGACTCCTACGTTCGCAATTTCAGCGAGGGCGGCGCTCTGAAACAACTGCTTGGCCAGAAAAAGTCTGACGCCGGTGAGTCTCTGCAAACCGCAGATAACCAGAAAGCGGCGTATGAAAGTGTGCTGCCCGCTGATTTCGTTAATGGTGAGCGTGAGAGCTACACGGCCAGCACCCTGTCCGAGCTGCAGAACTCCAAAAAAGGCCGCAAGTTGCTGGAGGGCAAGACCGATGAAGAGGGCGGCCCTTCGCTGGCCGCGCAGCTCGCCGAGCAAGGTATCGGAGGCAAGGCATTCAACTCGGTCATGGGCTTCGCGTCAGTGTCTGACAGGCTCGCCAGCGGTGACAAGCTGGGCGCGGCTCAGAGCATCATCGACAGTTCCAGGCTGGGCGCGGAGTCAATCAAGGGCGGCATAGACACCGGCGCGAAAATGATGGGTCGCGAGGCGTCCGCCGGCCTTGGTCGTCTGGGCGGACAGATGATCGGCCGCGCTGTCGGTCTGGTTGCCGGCGAAGCCACAGGGCTTGCCGCAGGCGCAGCGCTGGGCGCTGCAATCCCGGTCATCGGCTGGGCCATCGACGGCGCCATGGCGTTGGGTTTTGGTATTTCGGCGATTATCGACGCAGTCAAAAAGCACAAGGCGCAGAAGGCCTTCGATCATAACGTCGACCCGGTGCTGGATCAGTTCGGGATTGACAAGGCGCATTGA
Protein sequence:
MATMRISSSPSPALGSIVNQPTSGELAAETPLAKASLTQGSAGGGQAFVQFGQANDSPSSFSGTEQNGSSLMSLLTRSSSSDSTSSVDQDSEVSPMTSVSSTASASPTTASNPANAPSATDAAFLDNSEYSSPEALKRWEPMVANLPPEEREQAAKELNRPIAAAWMAREDGPNAEKAMAFINANPALKTAVDVGKDGGNADGKITNKDLKAFAKNMEKAADNADKDVAKYMEDNPGADPQSLEMVRSAAVMRANMPLATAADPHHAVGAADKTDVDGNVSAEGLKALIKSNPGLSGTLKQSSNMWSQAGFLSQVDEAGLTGRKKAAHSPDQVFDASNMSEWIRKSAPKNGGQFASMLSDAATLNSVAGIDISKLNAQVFEKPKAYTGAQKAAVMIKLQQTQQSVIAGRDLRNTEKTEAGLNERIAQLQADPDVQEYLNKSIPEQERSLVRSDSALQKAVTEQAQNVNSGKALQTDMATADKAVDKHNPNPDYSGAITGLSVQLQLQKDLFPDAQVPTAQQVFNNQPDELQTKIADSYVRNFSEGGALKQLLGQKKSDAGESLQTADNQKAAYESVLPADFVNGERESYTASTLSELQNSKKGRKLLEGKTDEEGGPSLAAQLAEQGIGGKAFNSVMGFASVSDRLASGDKLGAAQSIIDSSRLGAESIKGGIDTGAKMMGREASAGLGRLGGQMIGRAVGLVAGEATGLAAGAALGAAIPVIGWAIDGAMALGFGISAIIDAVKKHKAQKAFDHNVDPVLDQFGIDKAH
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
80144.1 | 770 | 5.09 | -0.415 | 36.53 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Arabidopsis thaliana | Disease name: Brown spot |
Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR031613
Pfam: PF16937
SMART:
KEGG: psb:Psyr_1218
PRINTS: