Effector profile
| PlantPEAD ID: PlantPEAD00037 | Uniprot ID: Q4ZX84 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HrpW1 | NCBI Gene ID: CP000075 | |
| Entry name: Q4ZX84_PSEU2 | Protein name: pectate lyase | |
| DOI: 10.1111/j.1365-2958.2006.05350.x | ||
Gene/Protein information
Gene sequence:
ATGAGCATCGGTATCAACTCATCCACCTCCTACCAACCCGCTTCAACCCAGCTGGACTTCTCGGCGCTGAGCGGCAAGAGTCCGCAGACCAATACGTTCAGCGATGAGAGCACTGCACAGGGCGTCGACCCGAGTGCCCTGCTGTTCGACACTGCCAGACAGAAAGACGTCAGCTTCGGACAGCCCGACAATACGGTTCAAAACCCCACCGACAGCAGCGCTGCAACTGACCCTCAATCCAACGTCGTCAAGCTGCTCAGTGCACTCGTCACATCGCTGCTGCAAATGCTCATGAACCTCAATAAAAAACAGGACACGGGTCAGGACTCCAACGAGTGGCAAGACCCGTTTCAAAACGAGGGAGGACTCGGTACGCCATCGGCCGAAGGCAGTGACGGTGGTACTCAGGAGGCTTCAGGCGGTGACGAGGGCGGCGGTACAACGGCGGCGACGGGTGGTGACGGTGGTGGCGGTACATCCCCGACCACTGAAGGTGACGGCGGCGGTACATCTCCAACCGCTGAAGGTGACGGCGGCGGTAGTTATGTGTCGACTGGCGCAGACGGCAGCGGCGCGCCTTCGACCGAGGACGGAACCGGCGGAGGCGGTGGCAGTGATGGCGTGACGCCTCAAGTCACCCCGCAACTGGCCAATCCCGGCCGCAACTCGGGCAACGGCACGGTTTCGGATACAACGGGCTCTCTTGAGCAATCCGGCGAAGTCAATGTCGTGAAAGACACCATCAAAGTCGGTGCTGGCCAGGTGTTTGACGGCCACGGTGCAACCTTTACCGCCGACAAGTCGATGGGCACCGGCGACCAGGACGAACATCAGAAGCCCCTGTTCGAACTGGCCGAAGGCGCTGTGCTGAAAAACGTGAACCTGGGCGAGAACGAAGCCGACGGCATCCACGTGAATGCCAAAAACTCGGAGCAAGTCACCATTGATAACGTGCACGCCCAGAACGTCGGTGAAGACATGATCACGGTCAAGGGCGAAGGCGGCGCAAAGGTCACCAACCTGAACATCACTAACAGCAGCGCCAACGGTGCCGATGACAAGGTCATTCAGCTCAATGCCGATACCCACCTGAAAGTCGACGGTTTCAAGGCCACCGATTTCGGTACGCTGGTCCGCACCAATGGTGGCAAGCAGTTTGATGACATGAGTGTCGAGCTCAATGGCGTGGACGCGACCCATGGCAAGTTCGCACTCGTCAAAAGCGACAGTGACGATCTGAAACTGGCCACTGGCGACATCGCCATGACCGACGTCAAGCACGCCTATGACAAGACCAAGGCGTCTACCCAGCACACCGAGCTCTGA
Protein sequence:
MSIGINSSTSYQPASTQLDFSALSGKSPQTNTFSDESTAQGVDPSALLFDTARQKDVSFGQPDNTVQNPTDSSAATDPQSNVVKLLSALVTSLLQMLMNLNKKQDTGQDSNEWQDPFQNEGGLGTPSAEGSDGGTQEASGGDEGGGTTAATGGDGGGGTSPTTEGDGGGTSPTAEGDGGGSYVSTGADGSGAPSTEDGTGGGGGSDGVTPQVTPQLANPGRNSGNGTVSDTTGSLEQSGEVNVVKDTIKVGAGQVFDGHGATFTADKSMGTGDQDEHQKPLFELAEGAVLKNVNLGENEADGIHVNAKNSEQVTIDNVHAQNVGEDMITVKGEGGAKVTNLNITNSSANGADDKVIQLNADTHLKVDGFKATDFGTLVRTNGGKQFDDMSVELNGVDATHGKFALVKSDSDDLKLATGDIAMTDVKHAYDKTKASTQHTEL
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44713.9 | 441 | 4.25 | -0.618 | 21.52 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Brown spot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: psb:Psyr_1184
PRINTS: