Effector profile
| PlantPEAD ID: PlantPEAD00038 | Uniprot ID: Q4ZX75 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HrpZ1 | NCBI Gene ID: CP000075 | |
| Entry name: Q4ZX75_PSEU2 | Protein name: Harpin HrpZ | |
| DOI: 10.1111/j.1365-2958.2006.05350.x | ||
Gene/Protein information
Gene sequence:
ATGCAGAGTCTCAGTCTTAACAGCAGCTCGCTGCAAACCCCGGCAATGGCCCTTGTCCTGGTGCGTCCTGAAACCGAGACGACTGGCGCCAGTTCGTCGAGCAAGGCGCTTCAGGAAGTTGTCGTGAAGCTGGCCGAGGAACTGATGCGCAACGGTCAACTCGACGACAGCTCGCCATTGGGCAAACTGCTGGCCAAGTCGATGGCCGCGGATGGCAAGGCAGGCGGCGGTATCGAGGATGTCATCGCTGCGCTGGACAAGCTGATCCATGAAAAGCTGGGTGACAACTTCGGCGCGTCTGCGGACAACGCCTCGGGTACCGGACAGCAGGACCTGATGACTCAGGTGCTCAATGGCCTGGCCAAGTCGATGCTCGATGATCTTTTGACCAAGCAGGATGGCGGGACAAGCTTCTCCGAAGACGATATGCCGATGCTGAACAAGATCGCGCAGTTCATGGATGACAATCCCGCACAGTTTCCCAAGCCGGACTCGGGTTCCTGGGTGAACGAACTCAAGGAAGACAACTTCCTTGATGGCGACGAAACGGCTGCATTCCGCTCGGCACTCGACATCATTGGCCAGCAACTGGGTAATCAGCAGAGTGGCACTGGCGGTCTGGCGGGGACGGGTGGAGGTCTGGGCACTCCGAGCAGTTTTTCCAGCAACTCGTCCGGTGTGAAGGGTGACCCGCTGATCGACGCCAATACCGGTCCCGGTGACAGCGGCACTACCAGTGGAGAAGCGGGGCAACTGATCGGCGAGCTTATCGACCGTGGCCTGCAATCGGTATTGGCCGGTGGTGGACTGGGCACACCCGTAAACACCCCGCAGACCGGCACGGCGGCGAATGGCGGACAGTCCGCGCAGGATCTTGACCAGTTGCTGGGCGGCTTGCTGCTCAAGGGCCTTGAAGCGACGCTCAAGGACGCCGGACAAACCGCTACCGACGTGCAGTCGAGCGCTGCGCAAATCGCCACCTTGCTGGTCAGTACGCTGCTGCAAGGCACCCGCAATCAGGCCGCGGCCTGA
Protein sequence:
MQSLSLNSSSLQTPAMALVLVRPETETTGASSSSKALQEVVVKLAEELMRNGQLDDSSPLGKLLAKSMAADGKAGGGIEDVIAALDKLIHEKLGDNFGASADNASGTGQQDLMTQVLNGLAKSMLDDLLTKQDGGTSFSEDDMPMLNKIAQFMDDNPAQFPKPDSGSWVNELKEDNFLDGDETAAFRSALDIIGQQLGNQQSGTGGLAGTGGGLGTPSSFSSNSSGVKGDPLIDANTGPGDSGTTSGEAGQLIGELIDRGLQSVLAGGGLGTPVNTPQTGTAANGGQSAQDLDQLLGGLLLKGLEATLKDAGQTATDVQSSAAQIATLLVSTLLQGTRNQAAA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34720.4 | 343 | 4.19 | -0.23 | 36.49 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Brown spot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR006961
Pfam: PF04877
SMART:
KEGG: psb:Psyr_1193
PRINTS: