Effector profile
| PlantPEAD ID: PlantPEAD00039 | Uniprot ID: Q4ZX49 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: AvrB3 | NCBI Gene ID: CP000075 | |
| Entry name: Q4ZX49_PSEU2 | Protein name: Type III effector protein AvrB3 | |
| DOI: 10.1111/j.1365-2958.2006.05350.x | ||
Gene/Protein information
Gene sequence:
ATGGGTTGCGTATCGTCAAAAGCATCTGTCATTTCTTCGGACAGCTTTCGCGCATCATATACAAACTCTCCAGAGGCATCCTCAGTCCATCAACGAGCCAGGACGCCAAGGTGCGGTGAGCTTCAGGGGCCCCAAGTGAGCAGATTGATGCCTTACCAGCAGGCGTTAGTAGGTGTGGCCCGATGGCCTAATCCGCATTTTAACAGGGACGATGCGCCCCACCAGATGGAGTATGGAGAATCGTTCTACCATAAAAGCCGAGAGCTTGGTGCGTCGGTCGCCAATGGAGAGATAGAAACGTTTCAGGAGCTCTGGAGTGAAGCTCGTGATTGGAGAGCTTCCAGAGCAGGCCAAGATGCTCGGCTTTTTAGTTCATCGCGTGATCCCAACTCTTCACGGGCGTTTGTTACGCCTATAACTGGACCATACGAATTTTTAAAAGATAGATTCGCAAACCGTAAAGATGGAGAAAAGCATAAGATGCTGGATTTTCTCCCACACAGCAATACGTTTAGGTTTCATGGGAAAATTGACGGTGAGCGACTTCCTCTCACCTGGATCTCGATAAGTTCTGATCGTCGTGCCGACAGAACAAAGGATCCTTACCAAAGGTTGCGCGACCAAGGCATGAACGATGTGGGTGAGCCTAATGTGATGTTGCACACCCAAGCCGAGTATGTGCCCAAAATTATGCAACATGTGGAGCATCTTTATAAGGCCGCTACGGATGCTGCATTGTCCGATGCCAATGCGCTGAAAAAACTCGCAGAGATACATTGGTGGACGGTACAAGCTGTTCCCGACTTTCGTGGAAGTGCAGCTAAGGCTGAGCTCTGCGTGCGCTCCATTGCCCAGGCAAGGGGCATGGACCTGCCGCCGATGAGACTCGGCATCGTGCCGGATCTGGAAGCGCTTACGATGCCTTTGAAAGACTTTGTGAAAAGTTACGAAGGGTTCTTCGAACATAACTGA
Protein sequence:
MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVARWPNPHFNRDDAPHQMEYGESFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHKMLDFLPHSNTFRFHGKIDGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKAATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVPDLEALTMPLKDFVKSYEGFFEHN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36597.1 | 323 | 7.8 | -0.648 | 32.5 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008798,IPR036231
Pfam: PF05394
SMART:
KEGG: psb:Psyr_1219
PRINTS: