Effector profile
PlantPEAD ID: PlantPEAD00040 Uniprot ID: Q888W0 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tomato strain ATCC BAA-871 / DC3000 Other name: Pseudomonas syringae tomato
Gene name: HopAI1 NCBI Gene ID: AE016853
Entry name: Q888W0_PSESM Protein name: Type III effector HopAI1
DOI: 10.1111/j.1365-2958.2006.05350.x; 10.1126/science. 1203659
Gene/Protein information
Gene sequence:
ATGCTCGCTTTGAAGCTGAACACTTCAATTGCACAGGCGCCCCTCAAGAAAAATGCGGAAGCTGAACTTCGCCACATGAATCACGCAGAGGTGCGTGCTCATACACCGACGCGCTTTACCTTGAACCATCGTGCTCCCACTTACGAAGTTGCGCAAAGCGCTCTGGGTGAAAATCATGGTGGCTGGACGGCTGTCAATAAATTCAAGGTGACAGAGTCTGAAGTGTTTATTCACATGGAGCGCAGTGATTCAAGGAGCAAGGGAGATTTCGCCGGAGACAAGATTCACCTCAGCGTTGCCCCTCAGCATGTGGCCAGTGCATTCAATGCGATAGGCAAAATATTGCAAGCCGACGACAGCCCCGTCGACAAATGGAAAGTCACCGACATGAGTTGCGCGAGTTCCGACTTGCAGCCTGAAAAAAAGCGCGTCACGCAGGGGGCTCAATTCACGCTGTACGCCAAACCTGATCGCGCGGACAACACTTACAGCCCCGAATACATGGGGAAAATGCGCGGCATGATCAGCAGTATCGAGCGTGAGTTGCACACAGCCGGCGTACAGCAAAGCAATAATCGCCCTGCATCGGATGTAGCGCCCGGTCACTGGGCGTATGCGTCTTATCGCAATGAACACAGAAGCGAAAGAGCGGGGTCCTCCAGCCAGGCCAATGAACTGGAAAAAGAGCCGTTTTTCCAATTGGTTTCATTTCCCGACGTGGCTGCTTCGCCCGTGAAATCAGGCGCGTCAAGCCGTTCGCTGATGCCACCGCCCTGGACTCGCTGA
Protein sequence:
MLALKLNTSIAQAPLKKNAEAELRHMNHAEVRAHTPTRFTLNHRAPTYEVAQSALGENHGGWTAVNKFKVTESEVFIHMERSDSRSKGDFAGDKIHLSVAPQHVASAFNAIGKILQADDSPVDKWKVTDMSCASSDLQPEKKRVTQGAQFTLYAKPDRADNTYSPEYMGKMRGMISSIERELHTAGVQQSNNRPASDVAPGHWAYASYRNEHRSERAGSSSQANELEKEPFFQLVSFPDVAASPVKSGASSRSLMPPPWTR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
28860.3 261 8.89 -0.671 53.37
Plant infestation information
Experimental plant:
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana Disease name: Bacterial speck
Host classification: Eudicots NCBI Species: 4081, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q39026
Mitogen-activated protein kinase 6
MPK6
Arabidopsis thaliana (related: thale cress)
MDGGSGQPAADTEMTEAPGGFPAAAPSPQMPGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSETNESVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSESDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEEELEFLNENAKRYIRQLPPYPRQSITDKFPTVHPLAIDLIEKMLTFDPRRRITVLDALAHPYLNSLHDISDEPECTIPFNFDFENHALSEEQMKELIYREALAFNPEYQQ
Q39023
Mitogen-activated protein kinase 3
MPK3
Arabidopsis thaliana (related: thale cress)
MNTGGGQYTDFPAVETHGGQFISYDIFGSLFEITSKYRPPIIPIGRGAYGIVCSVLDTETNELVAMKKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARPTSENDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMNRKPLFPGKDHVHQMRLLTELLGTPTESDLGFTHNEDAKRYIRQLPNFPRQPLAKLFSHVNPMAIDLVDRMLTFDPNRRITVEQALNHQYLAKLHDPNDEPICQKPFSFEFEQQPLDEEQIKEMIYQEAIALNPTYG
Q39024
Mitogen-activated protein kinase 4
MPK4
Arabidopsis thaliana (related: thale cress)
MSAESCFGSSGDQSSSKGVATHGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKLGDFGLARTKSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGETMTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYPRQNFAARFPNMSAGAVDLLEKMLVFDPSRRITVDEALCHPYLAPLHDINEEPVCVRPFNFDFEQPTLTEENIKELIYRETVKFNPQDSV