Effector profile
| PlantPEAD ID: PlantPEAD00043 | Uniprot ID: Q48B68 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola strain 1448A / Race 6 | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: AvrD1 | NCBI Gene ID: CP000059 | |
| Entry name: Q48B68_PSE14 | Protein name: Syringolide biosynthetic protein AvrD1 | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGCAAGACCTTAGCTTTAGCACTATAGAAAATCATTTGGGACCCGCTAAAGATCGTTTCTTTGGTGATGGTTTCAAACATGTGGAGTATAGTGCTAGACATGTTAATCTTACTGAAAGTGAAGCGAACGCAAGTATAAGTCTTAGCTACCCAGCCAACTGGTCAAAAAAGAACGATAGTGGCGAACTAATACCGCACTTGAGCTCCATTGACGCATTGACAATTTCAATTAATCTAAGCCAGGATATTCTACTGAATAGATTCAAAAGTATTGATCACTGTTGGGTGAGAAGAATATCTATCAGGGCCGGAAAAAAACCTGAAGAAGATCTACGTAATATCAATGCGAAAATAACTAAAGAAAGCCAAGGCTTGGACTCCCAAGGGGATACGAATTTAATTTTTGGTGGTAATGTTGGCACGATGACAGTGCAGTTGGAGTTTATCATTCCCGCCGCTCACGAAGTCGACACCATTAAGGATAGTACCGAGAAAAACTGTTACTCTCTACATTTTAAAAATCGCACTCAATTCATCGACGATATTATTTTTTACTCGCCACTCAACGCCATATCAAAACTTTTTGTCGCTAATGATAACGAGCCCCATTTTTTACCTGGCGGAATCGAGGCTAATTACCCTAACATTATAAATCCCGTAGATTCACTTGTCAGTCACGCACAAATAGCGCAAGCACTTCTTTACAAACTCGATGGTTTGACTCGTGGTGAATCAAACACCTTATGGATGAGGAACTTGAATATTATCGCCGAGAATCCCGCAAAGCGCAGAGCGGCGACTCGATTACTAGTAACCGAACTAAAACGTGCTAATATTGTTTCATTAAAGGGTGAAAACTGGCGAGTAGCGGAAGTGGCTGGACATATGAATGGTATCACCTTTTCTAGTTCAGTTGCGCATTTATTACCCCTTTAG
Protein sequence:
MQDLSFSTIENHLGPAKDRFFGDGFKHVEYSARHVNLTESEANASISLSYPANWSKKNDSGELIPHLSSIDALTISINLSQDILLNRFKSIDHCWVRRISIRAGKKPEEDLRNINAKITKESQGLDSQGDTNLIFGGNVGTMTVQLEFIIPAAHEVDTIKDSTEKNCYSLHFKNRTQFIDDIIFYSPLNAISKLFVANDNEPHFLPGGIEANYPNIINPVDSLVSHAQIAQALLYKLDGLTRGESNTLWMRNLNIIAENPAKRRAATRLLVTELKRANIVSLKGENWRVAEVAGHMNGITFSSSVAHLLPL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34662.3 | 311 | 6.42 | -0.264 | 38.67 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008799
Pfam: PF05655
SMART:
KEGG: psp:PSPPH_A0113
PRINTS: