Effector profile
| PlantPEAD ID: PlantPEAD00044 | Uniprot ID: Q8H6Z6 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: 90128 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: CRN1 | NCBI Gene ID: AF424675 | |
| Entry name: CRN1_PHYIN | Protein name: Crinkler effector protein 1 | |
| DOI: 10.1101/gr.910003 | ||
Gene/Protein information
Gene sequence:
GCGGCTCGAGGAACTATGGTAACTTTGTACTGTGTCGTCGTTGGTGTGGCTGGGAGCGCGTTCCCTGTGGACATTGACGAGAACAAGTCCGTGGGGCACTTGAAGGACGCGATCAAGGAGAAGAACGCATCGACGATCACATGCGACGCCAAGAACCTGCAGCTCTTCCTGGCGAAGAAGAAGAAAGGCGCTGGGGTAAGGCTAACGGAGAACGACGTGAAGGACGGTGTCAGTGACACGAGTGATTTGAAGCTATTGGGCGTTGCAGGAGCGCCGCTCAGCTTGGTTGGCTTGTCGGAGAAGGACGTCAAGTTCGTACCCACGCTAGAGGATGTCGAGTCAATGAACACACCTGTTCACGTGCTGGTGGTGGTTCCGGAGCAAGACGGTACTATCTCAAAAGAGATGTCTGCAGCGACATCGCCACTGACAGTAGAGCAAGTGGAGATGTCAATGAATAAGGTTCTCAGGGAACGAGATGAGAAGGCGTCTGCGTATTCGTTTTCCGATCTGAATACTGCGATGGAAGAGCGAATTGTCAAGAAGATGCGCTTGACCGAAAATATTCCTGATGTCAAGGAGCCAGTCGATACTTCCATCGCCGGTTATTCGTGGATTCCAAAAATCGTGGAGAGCGAGGAAAGTCAAAGGGCTGGGTACATGGAGTACTTGCAGCAGCATTTGAAGACGCTGATCGATCGAGGAGACTTCTTGTTGGATGACATTGCGGGCGATAAATCAGTTCTTAACATCGTGGACCCAAGACTTCCGTTTGCTATGAAAGGCACAGCTGATGTATTGCTCATCAATCGAACAGCGAAGAACCCACTGATTAAGCTGGCTGGGGTCAGCTTGGTGATCGAGCTCAAGAAGAAAGTCGAACCGGGCCATGTTCCTCAAGCAATTGGTCAACTTGTGAGCTGCAGCATGAAGGCGCCTCTCAATTGCTATCCGCTGAGTTTGTTGACGGATTTAAACGACCACTGGCATTTCTCTTGGTTCAGCGACAAGCACGTTCTGACCCAAGTTACGTTGAAGTATCCAAAGAACGCGTTCAGATTTATCGAGGCAGCCGTACTGGGACGAACGGATTCTGCCCCACCTCCTCCGTCATTCATGCCTGGATCTTTCAAGACAATCAAGGTTGATGACTTCTTGCCCCAGCCGGTTGATGCTCGTGCAGAGGAGATGATGGAACGATACGAGTTGATGGCAGATGTGGTGGAACCAGAGTTTCTCATGGCGAGGCGGATGGATTATGCGCGACAGTTAGTCCAGTCGATGCCTATGTACTCTTACATGTATACGTAGTTCGTCGTTTCGATCTTCACGAGTCACTATCGTGAATGAACTTTTATCGCTGTGGTGTATGTGCCTAGGACTACCAGCTTTTTAACTTTTCTACCCTGAAAAATATAAAATTAATAATAAACAAAGATGGAGGTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein sequence:
MVTLYCVVVGVAGSAFPVDIDENKSVGHLKDAIKEKNASTITCDAKNLQLFLAKKKKGAGVRLTENDVKDGVSDTSDLKLLGVAGAPLSLVGLSEKDVKFVPTLEDVESMNTPVHVLVVVPEQDGTISKEMSAATSPLTVEQVEMSMNKVLRERDEKASAYSFSDLNTAMEERIVKKMRLTENIPDVKEPVDTSIAGYSWIPKIVESEESQRAGYMEYLQQHLKTLIDRGDFLLDDIAGDKSVLNIVDPRLPFAMKGTADVLLINRTAKNPLIKLAGVSLVIELKKKVEPGHVPQAIGQLVSCSMKAPLNCYPLSLLTDLNDHWHFSWFSDKHVLTQVTLKYPKNAFRFIEAAVLGRTDSAPPPPSFMPGSFKTIKVDDFLPQPVDARAEEMMERYELMADVVEPEFLMARRMDYARQLVQSMPMYSYMYT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 47907.4 | 431 | 5.38 | -0.149 | 38.95 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR045379
Pfam: PF20147
SMART:
KEGG:
PRINTS: