Effector profile
PlantPEAD ID: PlantPEAD00047 | Uniprot ID: Q6TA23 | Source: Database |
Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 67593 | Pathogen type: Oomycota |
Species: Phytophthora sojae | Strain: race 7 strain P6497 | Other name: Phytophthora megasperma f. sp. glycines |
Gene name: Avr1b-1 | NCBI Gene ID: AY426744 | |
Entry name: Q6TA23_PHYSO | Protein name: Putative phosphatidylinositol-4-phosphate binding protein | |
DOI: 10.1093/nar/gkab1037 |
Gene/Protein information
Gene sequence:
ATGGCCGCGCTCTGCGATATCTCGCTCGTGATCGACTCACAAAACATCACAAAGCGGACGCTCGCGCTCGAGAAGAACTGGGTCCCCAATGAAAGTCGCTCTTGTTGCACCGTTTGCAGCCGCAAGTTCCACAAGCTGCATCGTCGCCGACAGCACTGTCGAATGTGCGGCGACGTCATCTGCAAGACCTGCTACGTTACTCGGTCTGTGCCTGCAGCGAACACCGACGACGATGCTCGCAAATGCAAATTTAAGGGTTCGGGTGCTACTCGCCCGACGAAAGTTTGCGTGCGATGCGTCATGGACCTCCGTGGTGTCGACAAGCGGCTCAACAACTTCTCGCCAAACGTCTCGAAAATGCTCTTAGTTGGTACGGACTCGACGGACGCGAAGCGAGAGCCCGCTGTGGGGGGTTGTGCGTTGAAATCGGCAGATTCCTTCTTCACCTTCTACGAACTGGGCGCGAGCAAGAACAGTGCTGCGGACCTCAACCAGCTCCAGATCGTCCCTTCACTGGCACTCACCGGCATCGATGGTGAACTGGAGAATAAGGCGAGCTCGTCCAGTTTTCGAGCTACTGACAGTATCGGCGGAATTGGGGCAATGGTTTCGGTCGGATCGTGGGCCTCCAAGCGCACAGGCCCATCGTTCTCCACCAACCCGGCCCACTCAAGTTCATCCGGTAGACTTCGTGGTCCCTCCCAACTCAGCCGCCGCAGCTCTACGTCGAGTGGGGCCGACAAGCTCGAAGAGAAGGTGAATCTTCAGAGCAACAAGATCCACCGTGTTGTCGCCATTTAA
Protein sequence:
MAALCDISLVIDSQNITKRTLALEKNWVPNESRSCCTVCSRKFHKLHRRRQHCRMCGDVICKTCYVTRSVPAANTDDDARKCKFKGSGATRPTKVCVRCVMDLRGVDKRLNNFSPNVSKMLLVGTDSTDAKREPAVGGCALKSADSFFTFYELGASKNSAADLNQLQIVPSLALTGIDGELENKASSSSFRATDSIGGIGAMVSVGSWASKRTGPSFSTNPAHSSSSGRLRGPSQLSRRSSTSSGADKLEEKVNLQSNKIHRVVAI
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
28695.7 | 266 | 9.62 | -0.358 | 54.06 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Glycine max | Disease name: Root and stem rot of soybean |
Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR000306,IPR017455,IPR011011,IPR013083
Pfam: PF01363
SMART: SM00064
KEGG:
PRINTS: