Effector profile
| PlantPEAD ID: PlantPEAD00053 | Uniprot ID: Q9AT28 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4792 | Pathogen type: Oomycota |
| Species: Phytophthora parasitica | Strain: | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: NPP1 | NCBI Gene ID: AF352031 | |
| Entry name: NPP1_PHYPR | Protein name: Necrosis-inducing protein NPP1 | |
| DOI: 10.1046/j.1365-313x.2002.01454.x | ||
Gene/Protein information
Gene sequence:
ATGAACGTCCTTACGTTCCTCATAGCAGCCGCAGTATCACTCGCTGTCGTCCAAGCCGACGTGATCTCGCACGATGCCGTTGTCCCGTTCGCCCAACCCACAGCCACCACTACGGAACAGAAGGCTGGTGTCAAGTTCAAACCGCAGATCCACATCTCGAACGGCTGTCATCCGTATCCTGCAGTGGATGCGAACGGCAATACCAGTGGCGGTCTGAAGCCTACCGGTTCCTCTAGTGCGGGCTGCAAGGGCTCCGGATACGGCAGTCAAGTCTACGGTCGAGTGGCTACGTACAATGGCGTCTACGCTATCATGTACTCGTGGTATTTCCCTAAGGACTCGCCAGTCACTGGACTGGGGCATCGCCACGACTGGGAGCACGTGGTCGTCTGGGTCGACGATATCAAACTCGATAGTCCGTCGATCATCGCTGTGTCGCCTTCTGCCCACAGTGGCTACAACATCTACTATCCACCCGAATCCAACACCATCGACGGCTACAGTGCCAAGGTGGACTACTCGTCCAGTTGGGTGGTGATCAATCACGCGCTGGACAGCACGACGGACGCTGGAGAAACCCAGGATCTGATCATGTGGGATCAACTCACGGACGCAGCACGCACGGCGCTGGAAAATACGGACTTCGGCGACGCTAACGTCCCCATGAAGGACGGCAATTTCCTAACCAAGGTAGGCAACGCTTACTACGCTTAG
Protein sequence:
MNVLTFLIAAAVSLAVVQADVISHDAVVPFAQPTATTTEQKAGVKFKPQIHISNGCHPYPAVDANGNTSGGLKPTGSSSAGCKGSGYGSQVYGRVATYNGVYAIMYSWYFPKDSPVTGLGHRHDWEHVVVWVDDIKLDSPSIIAVSPSAHSGYNIYYPPESNTIDGYSAKVDYSSSWVVINHALDSTTDAGETQDLIMWDQLTDAARTALENTDFGDANVPMKDGNFLTKVGNAYYA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25376.2 | 237 | 5.02 | -0.166 | 30.03 |
Plant infestation information
| Experimental plant: Petroselinum crispum (related: parsley), Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Petroselinum crispum, Arabidopsis thaliana | Disease name: Buckeye rot |
| Host classification: Eudicots | NCBI Species: 4043, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG:
PRINTS: