Effector profile
PlantPEAD ID: PlantPEAD00057 Uniprot ID: P13835 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. glycinea race 4 Other name: Pseudomonas savastanoi pv. glycinea
Gene name: AvrB NCBI Gene ID: M21965
Entry name: AVRB_PSESG Protein name: Avirulence protein B
DOI: 10.1128/jb.170.10.4846-4854.1988
Gene/Protein information
Gene sequence:
ATGGGCTGCGTCTCGTCAAAAAGCACCACAGTGCTTTCTCCACAGACATCTTTTAATGAAGCCTCCCGTACGTCTTTCAGAGCACTCCCCGGCCCATCGCAAAGACAATTGGAGGTCTATGATCAATGCTTAATTGGTGCAGCGCGCTGGCCTGACGATTCCAGTAAGTCGAATACGCCTGAAAACAGGGCATATTGTCAGAGCATGTACAACTCAATTCGCTCTGCTGGAGATGAAATTTCCAGAGGTGGAATCACATCTTTTGAGGAACTATGGGGGCGCGCAACTGAATGGCGACTTTCAAAGTTGCAGAGAGGAGAGCCGTTATACTCTGCATTCGCCTCCGAAAGGACGTCCGATACAGACGCAGTAACCCCTCTGGTCAAACCTTACAAGTCTGTCCTTGCCAGAGTCGTTGATCACGAGGATGCCCACGATGAAATAATGCAGGACAATTTGTTTGGCGATCTGAATGTTAAAGTATATCGCCAAACAGCATACCTCCATGGAAATGTTATTCCACTTAACACTTTTCGCGTCGCGACAGATACTGAATATCTGAGAGATCGAGTAGCGCATCTGAGAACAGAGTTGGGCGCAAAAGCTCTTAAACAGCATTTGCAGAGATACAATCCTGATAGAATAGACCATACGAACGCTTCCTATTTACCCATAATAAAAGATCATTTAAATGATCTTTACAGACAAGCAATATCTTCCGATTTAAGCCAAGCCGAATTGATAAGCCTGATAGCCCGTACCCATTGGTGGGCTGCGAGTGCAATGCCTGACCAAAGAGGTAGTGCTGCTAAGGCCGAGTTTGCAGCTAGAGCCATAGCTAGCGCACATGGTATAGAGCTCCCGCCTTTTCGAAATGGTAACGTTTCGGATATAGAAGCGATGCTCAGCGGAGAGGAGGAATTCGTAGAAAAATACAGAAGCTTGCTAGATTCTGATTGCTTTTAA
Protein sequence:
MGCVSSKSTTVLSPQTSFNEASRTSFRALPGPSQRQLEVYDQCLIGAARWPDDSSKSNTPENRAYCQSMYNSIRSAGDEISRGGITSFEELWGRATEWRLSKLQRGEPLYSAFASERTSDTDAVTPLVKPYKSVLARVVDHEDAHDEIMQDNLFGDLNVKVYRQTAYLHGNVIPLNTFRVATDTEYLRDRVAHLRTELGAKALKQHLQRYNPDRIDHTNASYLPIIKDHLNDLYRQAISSDLSQAELISLIARTHWWAASAMPDQRGSAAKAEFAARAIASAHGIELPPFRNGNVSDIEAMLSGEEEFVEKYRSLLDSDCF
Protein structure:
PDB(X-ray)(1NH1)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
36008.2 321 5.76 -0.514 34.6
Plant infestation information
Experimental plant: Glycine max (related: soybean)
Susceptible plant: Glycine max Disease name: Bacterial blight of soybean
Host classification: Eudicots NCBI Species: 3847
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q8GYN5
RPM1-interacting protein 4
RIN4
Arabidopsis thaliana (related: thale cress)
MARSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSSCCCFGFGGK
Q8L7H4
Homeobox-leucine zipper protein HDG4
HDG4
Arabidopsis thaliana (related: thale cress)
METKDKKEKGHMVLNSDNVFGSVSSSPTTTIQNPNYFTSFENPNFPYIFPKEEYEVMSKIESGSGKSTGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSIVSMRNPSPSQEITPETNKNNNDNMLIAEEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAKTAQIISSGASGPSGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNITDLGVIPSVEARKNLMKLSQRMVKTFCLNIINSHGQAPTKDTVKIVSRKVCGGLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPSDGVEGSSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSALVNDVGN
Q9SE33
Cysteine and histidine-rich domain-containing protein RAR1
RAR1
Arabidopsis thaliana (related: thale cress)
MEVGSATKKLQCQRIGCNAMFTDDDNPQGSCQFHASGPFFHDGMKEWSCCKQRSHDFSLFLEIPGCKTGKHTTEKPVLAKSVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPKEQIKQTLNTPGQAEEEKIEPLAPPVQKAVIDINQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSSSPDPAV