Effector profile
PlantPEAD ID: PlantPEAD00058 Uniprot ID: P13836 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. glycinea race 4 Other name: Pseudomonas savastanoi pv. glycinea
Gene name: AvrC NCBI Gene ID: M22219
Entry name: AVRC_PSESG Protein name: Avirulence protein C
DOI: 10.1128/jb.170.10.4846-4854.1988
Gene/Protein information
Gene sequence:
ATGGGAAATGTTTGTTTCCGGCCTAGTAGAAGCCACGTTTCGCAAGAATTTTCTCAATCAGAATTTTCCACAGCCAGTCCAGTCAGGACATCTGAACGACCCTCGGATGCATCACTAGATGCTGGGCTAGAAAGCTCGAGTGCTTGTCACAGAAGCGGCCTGCGCGGTCCTGCGAAGCATTCCATGCTCAGTTTAGACGAAATTGGCCTAGTCGGTGCTGCGCGCTGGCCAGATGATGCGCCGGGCTTAAATATTTCCAACAAAAGCAATACGCAAGAAAATAAGCGATACTGTGAAAGCTTATATCAAGCAGCACGAATTGCTGGTGGCTCCATAGCGTCTGGCAGAGTTACTAGTTTCGATGGGCTTTGGCGAAACGCAACAAAATGGCGCTTATCTAGAATTCTTTCGGGCGATGCGTCAAAAATCGACTTCGCTACTGTTCGCATGCCCAATACCAGATTCGTAACTTCTTTGAGGCGACCGTATCACTCAGTAATTGAGCGAGTTAGAAATCATTCTGATGCAAATTCGGAAATATACGAAGGAGAATATCTAGGCGGAATTGAGACCAAGGTCTATCGTCAGCATGGCACGATTTCAAGTACAACTATTCCGATGACAATAGTAAGTGCAGTAGCGGATGACGATGATATACATGAAAGGTTAAAGAGCCTGCCAAAGAATGAGCGGCGGCACCTGAAAGATTTGATGGCGGCGTCACACCCTAACATGATCACACACACTGATGCAGTATATCTTCCAATGATCAAGGATCATTTAGAATCATTATATTTGCAAGCGATAGACCCTTCGCTTGAGCAGCACGAGGCCCTCGAGTTGATCGCTCGGATACACTGGTGGGCTGCAAGTGCAGCACCAGATAGGCGTGGCAGTGCTGCCAAAGCAGAGTTCGCCGCAAGATCAATCGCGTTCGCTCATGGTATTGAACTACCGCCATTCGAGCATGGTGCAGTTCCTGATATTGAAGCAATGCTCAGATCTGAAGAGCAATTTGTAGAAGATTACCCTAACCTTTTTGAGCGGCCCCCTCAGTAA
Protein sequence:
MGNVCFRPSRSHVSQEFSQSEFSTASPVRTSERPSDASLDAGLESSSACHRSGLRGPAKHSMLSLDEIGLVGAARWPDDAPGLNISNKSNTQENKRYCESLYQAARIAGGSIASGRVTSFDGLWRNATKWRLSRILSGDASKIDFATVRMPNTRFVTSLRRPYHSVIERVRNHSDANSEIYEGEYLGGIETKVYRQHGTISSTTIPMTIVSAVADDDDIHERLKSLPKNERRHLKDLMAASHPNMITHTDAVYLPMIKDHLESLYLQAIDPSLEQHEALELIARIHWWAASAAPDRRGSAAKAEFAARSIAFAHGIELPPFEHGAVPDIEAMLRSEEQFVEDYPNLFERPPQ
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
39147.8 352 6.21 -0.494 56.5
Plant infestation information
Experimental plant: Glycine max (related: soybean)
Susceptible plant: Glycine max Disease name: Bacterial blight of soybean
Host classification: Eudicots NCBI Species: 3847
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
F4JHK5
Myb/SANT-like DNA-binding domain protein
Arabidopsis thaliana (related: thale cress)
MLWYNDMHRILREPGMDQYGIPVERKEMKHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLTSQKAINRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEMYEELRTVCGDYQTPGKYNKVKKESSHHLNDVKQFEEDSVSFPLGSSEEHSDTDGTESYAGASEYMHEESQDLPPPRDPLRRPSKRSRNSDPCQEAMLVVASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK
Q8LAZ7
COP9 signalosome complex subunit 5a
CSN5A
Arabidopsis thaliana (related: thale cress)
MEGSSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS
Q9SCK1
Protein RESPONSE TO LOW SULFUR 1
LSU1
Arabidopsis thaliana (related: thale cress)
MANRGGCVTVAAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEAEEQLCSQLAELEVESLEQARDYHDRMLFLMDQISRLSSSSVVSSS
Q8GTS1
Basic leucine zipper 24
BZIP24
Arabidopsis thaliana (related: thale cress)
MFCCCKDCRGNQRVSNFDSLTGVFFGDLEFGPQNQRYIKMNEEEDKDQDRVTRGCSHTHSCNPPGPEDASHSHTCFHAHTHLIISDQQENDHSDSSNKKRLCGNREAVRKYREKKKARTAYLEDEVMRLQSLNEQFLRKLQSQEMVETELIRLRALLVEMQGKIEVELCSFSFQKQCNGSGFVFKEDGCNLATSNMMCEAARVECEEGQTLHDPIQSFVPQPPPFSR
Q8L7G9
SBP (S-ribonuclease binding protein) family protein
DL4875C
Arabidopsis thaliana (related: thale cress)
MPLLSDNERIGLFSDSSMAIQAQHPSRFFFNNSNGQEASDCSLQPQDTPFTNFTKAGVDSRKRSREVYSSALMNPPPPKPSQVIDITELLQKTPNVVSTGLRLFHDQSQNQQQFFSSLPGDVTGKIKRQRDELDRFIQTQGEELRRTLADNRERRYVELLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEARNWQLRAATREAEVSSLHAHLQQAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPERIELIGPSCRICRRKSATVMALPCQHLILCNGCDVGAVRVCPICLAVKTSGVEVLF
Q9STS3
Anaphase-promoting complex subunit 8
APC8
Arabidopsis thaliana (related: thale cress)
MVSKECCRNEIRAAIRQLSDRCLYSAAKWAGEQLVGIEQDPSNFTPANTRFQRGSSSIRRRFSTNESISTPLPSVGFSQAATPLPEEDEAIDGDIYLLAKSYFDCREYRRASHMLRDQVSKKSLFLRYYALYLAGEKRKEEEMIELEGPLGKSDAINRELVSLERDLSALRRTGAIDSFGLYLYGVVLKEKGNESLARASLVESVNSYPWNWSAWSELQSLCTSIEILNSLNLNNHWMKEFFLGNAYQELRMHTESLAKYEYLQGIFSFSNYIQAQTAKAQYSLREFDQVEIMFEELLRNDPYRVEDMDLYSNVLYAKEACAALSYLAHKVFLTDKYRPESCCIIGNYYSLKGQHEKAVMYFRRALKLNKKYLSAWTLMGHEYVEMKNTPAAIDAYRRAVDINPTDYRAWYGLGQAYEMMGMPFYALHYFRKSIFFLPNDSRLWIAMAKCYQTEQLYMLEEAIKCYKRAVNCTDTEGIALNQLAKLHQKLGRNEEAAYYFEKDLERMDAEGLEGPNMFEALVFLATHFKNHKKFEEAEVYCTRLLDYSGPEKEKAKSLLRGIRMAQTGFPSMDLEHFPI
Q9LT89
Transcription factor TCP19
TCP19
Arabidopsis thaliana (related: thale cress)
MESNHEGNAIQVIDQVTTMTHLSDPNPKTKPGMMLMKQEDGYLQPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNTQGFVPFWPMGMGTAFVTGGPDQMGQMWAIPTVATAPFLNVGARPVSSYVSNASDAEAEMETSGGGTTQPLRDFSLEIYDKRELQFLGGSGNSSPSSCHET