Effector profile
PlantPEAD ID: PlantPEAD00059 Uniprot ID: Q5D157 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain 1448A / Race 6 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: AvrB4-1 NCBI Gene ID: CP000058
Entry name: Q5D157_PSE14 Protein name: Type III effector AvrB4-1
DOI: 10.1126/science.1203659; 10.1128/JB.00260-10
Gene/Protein information
Gene sequence:
ATGGGATGCATTACTTCAAAACCACTGGTTAGCTCTCCCCGGTGGCATAATTCAGCTACTAATTCCGAAAATTTAGAAACTGGTCAAAGAAGCCATAAAGCCTCTCTTTATGGTGCTATTTCTGGATCACCGGAAAGGAGTGAATTGACTTGGCATCAGCAGTCGTTGGTTGGCGTAGCCCGATGGCCTGACAAAGAATATAATAGAGATCATGTCCCCCTGCAAATGGAATACGGTAGGTCTTTTTGGAATGAGTCGCGAAAAATAGGAAGTGCATTAGCTAATGGTGAAATTCAGAATTTTGAAGACTTATGGGAGAAAGCACGCGATTGGCGATGTTCAATGGCTAATCATGATGAGAATATATTTAAGAAACCTCGCAATAGTTATAATGAGTTTCCTTTTACAACCCCATTAATAAATCAATACAATTATATTAAAGAAAGATATAGTGCCCGTACTGATGGGAGCTTGCAAAAACTCGATGATGAAGGCTTATTGCCACCAGCAAAAGAATTTTTGATAACGGATAAGATTTTTGGAGAGCCAATAAGCCTGACAAAGATAGTTTGCAGTTCAGATAGTTCTGCGCACCGAGACCAAAGACGATATTCGGATTTATGGTCGCGAGGCTTAGACTATGGAGAGCCACACTACATCCAACATACTTCATCGGAAGAAGTCCCTAAAATTCTTCATCATGTAAACGATTTGTTTGATGAGGTCCTACAATCAAACTTATCTACCAAGAAAGCACTTAAGTTTTTAGGCGAAATTCACTGGTGGTTGGCACATGCTATGCCTGATGAAAGGGGGAGCGCAGCCAAGAGTGAGCTTTGTGTACGTGCTATAGCCCAAGCCAAGGGCTTAGATTTACCTCCTATGAAAAGTGGAATAGTTCCAGACTTGGAAGCAATGACTATGTCGCGTGAGCAATTTATCAAGCAGTATCCGTCAATGTTTGATGATTAA
Protein sequence:
MGCITSKPLVSSPQWHNSATNSENLETGQRSHKASLYGAMSGSPERSELTWHQQSLVGVARWPDKEYNRDHVPLQMEYGRSFWNESRKIGSALANGEIQNFEDLWEKARDWRCSMANHDENIFKKPRNSYNEFPFTTPLINQYNYIKERYSARTDGSLQKLDDEGLLPPAKEFLITDKIFGEPISLTKIVCSSDSSAHRDQRRYSDLWSRGLDYGEPHYIQHTSSEEVPKILHHVNDLFNEVLQSNLSTKKALKFLGEIHWWLAHAMPDERGSAAKSELCVRAIAQAKGLDLPPMKSGIVPDLEAMTMSREQFIKQYPSMFDD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
37039.5 323 6.07 -0.73 48.65
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Phaseolus vulgaris Disease name: Halo blight of bean
Host classification: Eudicots NCBI Species: 3885
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
O80719
Probable receptor-like protein kinase At2g47060
Arabidopsis thaliana (related: thale cress)
MSCFGCCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARAVAPGEGVH
Q9LUT0
Receptor-like cytoplasmic kinase 1
CARK1
Arabidopsis thaliana (related: thale cress)
MGCFGCCGGGEDFRRVSETGPKPVHNTGGYNGGHHQRADPPKNLPVIQMQPISVAAIPADELRDITDNYGSKSLIGEGSYGRVFYGILKSGKAAAIKKLDSSKQPDQEFLAQVSMVSRLRQENVVALLGYCVDGPLRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWHQRVKIAVGAARGLEYLHEKANPHVIHRDIKSSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGTLSTKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSVVTWATPKLSEDKVKQCVDARLNGEYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNPPRSAPQTPHRNPY