Effector profile
| PlantPEAD ID: PlantPEAD00060 | Uniprot ID: O08243 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. glycinea race 3 | Other name: Pseudomonas savastanoi pv. glycinea |
| Gene name: AvrD | NCBI Gene ID: U87227 | |
| Entry name: O08243_PSESG | Protein name: AvrD protein | |
| DOI: 10.1094/MPMI.1997.10.3.416 | ||
Gene/Protein information
Gene sequence:
ATGCAAGACCTTAGCTTTAGCACTATAGAAAATCATTTGGGACCCGCTAAAGATCATTTCTTTGGTGATGGTTTCAAACATGTGGAGTATAGTGCTAGACACGTTAATCTTACTGAAAGTGCAGCGAACGCAAGTATAAGTCTTAGCTACCCAGCCAACTGGTCAAAAAAGAACGATAGTGGCGAACTAATACCGCACTTGAGCTCCATTGACGCATTGACAATTTCAATTAATCTAAGCCAGGATATTCTACTGAATAGATTCAAAAGTATTGATCACTGTTGGGTGAGAAGAATATCTATCAGGGCCGGAAAAAAACCTGAAGAAGATCTACGTAATATCAATGCGAAAATAACTAAAGAAAGCCAAGGCTTGGACTCCCAAGGGGATACGAATTTAATTTTTGGTGGTAATGTTGGCACGATGACAGTGCAGTTGGAGTTTATCATTCCCGCCGCTCACGAAGTCGACACCATTAAGGATAGTACCGAGAAAAATTGTTACTCTCTACATTTTAAAAATCGCACTCAATTCATCGACGATATTATTTTTTACTCGCCACTCAACGCCATATCAAAACTTTTTGTCGCTAATGATAACGAGCCCCATTTTTTACCTGGCGGAATCGAGGCTAATTACCCTAACATTATAAATCCCGTAGATTCACTTGTCAGTCACGCACAAATAGCGCAAGCACTTCTTTACAAACTCGATGGTTTGACTCGTGGTGAATCAAACACCTTATGGATGAGGAACTTGAATATTATCGCCGAGAATCCCGCAAAGCGCAGAGCGGCGACTCGATTACTAGTAACCGAACTAAAACGTGCTAATATTGCTTCATTAAAGGGTGAAAACTGGCGAGTAGCGGAAGTGGCTGGACATATGAATGGTATCACCCTTTCTAGTTCAGTTGCGCATTTATTACCCCTTTAG
Protein sequence:
MQDLSFSTIENHLGPAKDHFFGDGFKHVEYSARHVNLTESAANASISLSYPANWSKKNDSGELIPHLSSIDALTISINLSQDILLNRFKSIDHCWVRRISIRAGKKPEEDLRNINAKITKESQGLDSQGDTNLIFGGNVGTMTVQLEFIIPAAHEVDTIKDSTEKNCYSLHFKNRTQFIDDIIFYSPLNAISKLFVANDNEPHFLPGGIEANYPNIINPVDSLVSHAQIAQALLYKLDGLTRGESNTLWMRNLNIIAENPAKRRAATRLLVTELKRANIASLKGENWRVAEVAGHMNGITLSSSVAHLLPL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34523.1 | 311 | 6.46 | -0.248 | 37.84 |
Plant infestation information
| Experimental plant: Glycine max (related: soybean) | |
| Susceptible plant: Glycine max | Disease name: Bacterial blight of soybean |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008799
Pfam: PF05655
SMART:
KEGG:
PRINTS: