Effector profile
| PlantPEAD ID: PlantPEAD00061 | Uniprot ID: Q52389 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain PT23 | Other name: Pseudomonas syringae tomato |
| Gene name: AvrE1 | NCBI Gene ID: U16118 | |
| Entry name: Q52389_PSESX | Protein name: Type III effector protein AvrE1 | |
| DOI: 10.1094/mpmi-8-0049 | ||
Gene/Protein information
Gene sequence:
GAACCTTCCTTATCATCTCCCCCCCAATAGACCAGCCCCGACACCAGCCGCCGCGACGGTCCTGACGCCGCGAATAGTCCACAGACTGGCAGCCCACACACAAGGCGCCCATAGCGAGGACTGCGATTTGAACAGCGCGAGCCAGCAAGCGTGGGCTCGATACGGGGAAGGCGACGGCGGGCATGGGCGGGAATGTCCTGAGCGTGTCCACCCTACGTGGCACGCTCGCCGTTACGGTTCCCTTTTGAAACCGAGATCGGCGCACACAACGCATTGCTGAATCCTTTCAGCCGTAAGTTTTTCCGATGGAACCCGCTGGCATTGCATGCCACTCATCCTGTGAAGGAATTTTCACGTTTGGTATCAGGCGGCTATCAGCGATAAAATGGACAGAGAGATTCACCGTGCAGTCACCATCGATCCACCGGAACACCGGAAGCATCATTCAGCCAACCGTCACCCCTGACGCACGTGCTGCAACTGACCTGCAGGAAAGAGCCGAACAACCCAGGCAACGCTCTTCGCACTCGTTGAGCAGTGTCGGCAAGCGGGCGCTGAAAAGCGTCGGTAAATTGTTCCAGAAATCCAAAGCGCCCGAGCAGAAAGCTGCCACGCCGCCCACCGCGAAAAACGTCAAGACGCCCCCGCCTGCTTCAAATGTGGCTACGCCCAGAAACAAAGCCCGCGAATCCGGTTTTTCCAACAGCAGCCCGCAAAATACCCATAGCGCACCCAAGTCGATTCTGCGTAACCACCCCAACCAGGCGAGCAGCTCGGGCGCGCAGACGCATAAATACACCCGGAAGCAGCCCCCCGTAAAAACCCTGCGCGTAAGGTTTGATCTGCCGCAAGACCGCCTTGAGCGCAGCCCGTCGTACCTCGATTCAGACAACCCGATGACCGATGAAGAAGCGGTCGCAAATGCCACTCGCCAATTCCGGTCACCTGACAGTCACCTGCAGGGCTCTGACGGTACGCGCATTTCAATGCTGGCCACAGATCCTGATCAGCCCAGCAGCTCCGGCAGCAAAATCGGTGATTCGGACGGACCGATTCCGCCGCGCGAGCCCATGCTGTGGCGCAGCAACGGAGGCCGTTTCGAGCTGAAAGACGAAAAACTGGTTCGCAACTCAGAGCCACAAGGCAGCATTCAGCTGGATGCCAAGGGAAAGCCTGACTTCTCCAGCTTCAATACGCCCGGCCTGGCTCCATTGCTCGATTCCATTCTTGCCACACCCAAGCAAACCTACCTGGCCCACCAAAGCAAAGACGGCGTGCACGGGCACCAGTTGCTACAGGCCAACGGCACCTTTCTGCACCTGGCGCAAGACGACAGCTCGCTGGCCGTGATCCGTAGCAGCAACGAAGCACTCCTTATAGAAGGAAAGAAACCACCGGCCGTGAAAATGGAGCGTGAAGACGGCAACATTCACATCGACACCGCCAGCGGCCGCAAAACCCAAGAGCTCCCAGGCAAGGCACACATCGCTCACATTACCAATGTGCTTCTCAGTCACGACGGCGAGCGTATGCGTGTGCATGAGGACCGTCTCTATCAGTTCGACCCGATAAGCACTCGCTGGAAAATACCGGAAGGCCTGGAGGATACCGCTTTCAACAGCCTGTCCACTGGCGGCAACGGCTCGGTTTATGCAAAAAGTGACGATGCCGTGGTCGACTTGTCGAGCCCGTTCATGCCGCACGTGGAAGTCGAAGACCTGCAGTCATTTTCAGTCGCGCCGGACAACAGAGCAGCGTTGCTCAGCGGCAAAACGACCCAGGCGATCCTACTGACTGACATGAGCCCGGTGATTGGCGCTGGACGCCGAAAAAAACCAAAGGCCTTGAGCTCGACGGCGGCAAGGCGCAGGCGGCGGCGGTCGGTTTGAGTGGCGACAAGCTGTTTATCGCTGACACTCAGGGCAGACTTTACAGTGCGGACCGTAGCGCATTCGAGGGCGATGACCCGAAATTGAAGCTGATGCCCGAGCAGGCAAACTTTCAGCTG
Protein sequence:
MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFQKSKAPEQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSSPQNTHSAPKSILRNHPNQASSSGAQTHKYTRKQPPVKTLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANATRQFRSPDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIPPREPMLWRSNGGRFELKDEKLVRNSEPQGSIQLDAKGKPDFSSFNTPGLAPLLDSILATPKQTYLAHQSKDGVHGHQLLQANGTFLHLAQDDSSLAVIRSSNEALLIEGKKPPAVKMEREDGNIHIDTASGRKTQELPGKAHIAHITNVLLSHDGERMRVHEDRLYQFDPISTRWKIPEGLEDTAFNSLSTGGNGSVYAKSDDAVVDLSSPFMPHVEVEDLQSFSVAPDNRAALLSGKTTQAILLTDMSPVIGAGRRKKPKALSSTAARRRRRRSV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 53812.2 | 494 | 9.74 | -0.786 | 62 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found), Glycine max (related: soybean) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR021085
Pfam: PF11725
SMART:
KEGG:
PRINTS: