Effector profile
| PlantPEAD ID: PlantPEAD00068 | Uniprot ID: Q6LAD6 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain JL1065 | Other name: Pseudomonas syringae tomato |
| Gene name: AvrRpt2 | NCBI Gene ID: Z21715 | |
| Entry name: ARPT2_PSEUB | Protein name: Cysteine protease avirulence protein AvrRpt2 | |
| DOI: 10.1128/jb.175.15.4859-4869.1993; 10.1111/j.1365-313X.2003.01984.x | ||
Gene/Protein information
Gene sequence:
CTTAACAAGCTCCCCGAGGTGCATGATGAAAATTGCTCCAGTTGCCATAAATCACAGCCCGCTCAGCAGGGAGGTCCCGTCACACGCGGCACCCACTCAGGCAAAGCAAACCAACCTTCAATCTGAAGCTGGCGATTTAGATGCAAGAAAAAGTAGCGCTTCAAGCCCGGAAACCCGCGCATTACTCGCTACTAAGACAGTACTCGGGAGACACAAGATAGAGGTTCCGGCCTTTGGAGGGTGGTTCAAAAAGAAATCATCTAAGCACGAGACGGGCGGTTCAAGTGCCAACGCAGATAGTTCGAGCGTGGCTTCCGATTCCACCGAAAAACCTTTGTTCCGTCTCACGCACGTTCCTTACGTATCCCAAGGTAATGAGCGAATGGGATGTTGGTATGCCTGCGCAAGAATGGTTGGCCATTCTGTCGAAGCTGGGCCTCGCCTAGGGCTGCCGGAGCTCTATGAGGGAAGGGAGGGCCCAGCTGGGCTACAAGATTTTTCAGATGTAGAAAGGTTTATTCACAATGAAGGATTAACTCGGGTAGACCTTCCAGACAATGAGAGATTTACACACGAAGAGTTGGGTGCACTGTTGTATAAGCACGGGCCGATTATATTTGGGTGGAAAACTCCGAATGACAGCTGGCACATGTCGGTCCTCACTGGTGTCGATAAAGAGACGTCGTCCATTACTTTTCACGATCCCCGACAGGGGCCGGACCTAGCAATGCCGCTCGATTACTTTAATCAGCGATTGGCATGGCAGGTTCCACACGCAATGCTCTACCGCTAAGTAGCAGGGTATCTTCACGTGGCGGCATCATGACAAGCCCATGATGCCGCCAG
Protein sequence:
MKIAPVAINHSPLSREVPSHAAPTQAKQTNLQSEAGDLDARKSSASSPETRALLATKTVLGRHKIEVPAFGGWFKKKSSKHETGGSSANADSSSVASDSTEKPLFRLTHVPYVSQGNERMGCWYACARMVGHSVEAGPRLGLPELYEGREGPAGLQDFSDVERFIHNEGLTRVDLPDNERFTHEELGALLYKHGPIIFGWKTPNDSWHMSVLTGVDKETSSITFHDPRQGPDLAMPLDYFNQRLAWQVPHAMLYR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 28157.6 | 255 | 6.64 | -0.551 | 48.22 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR022118
Pfam: PF12385
SMART:
KEGG: ag:CAA79815
PRINTS: