Effector profile
| PlantPEAD ID: PlantPEAD00072 | Uniprot ID: Q887D0 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: HopptoM | NCBI Gene ID: AF232004 | |
| Entry name: HOPM1_PSESM | Protein name: Effector protein HopM1 | |
| DOI: 10.1073/pnas.0401601101 | ||
Gene/Protein information
Gene sequence:
ATGATCAGTTCGCGGATCGGCGGGGCCGGTGGCGTCGAACTCAGCCGGGTAAACCAGCAGCACGATACTGTTCCCGCCCAGACAGCTCACCCAAATGCAGTCACTGCAGGCATGAATCCGCCGCTGACTCCCGATCAGTCAGGGTCACACGCGACAGAAAGCTCGTCTGCCGGCGCGGCGCGGCTGAATGTCGCGGCTCGACACACACAGCTTTTGCAGGCCTTCAAGGCTGAGCATGGGACGGCTCCGGTCAGCGGCGCGCCGATGATCAGTTCGCGTGCTGCGTTGTTGATCGGTAGTCTGCTGCAGGCCGAGCCTTTGCCTTTTGAAGTCATGGCCGAGAAATTGTCTCCTGAGCGCTATCAACTGAAGCAGTTTCAGGGCTCGGACTTGCAGCAGCGGCTGGAAAAATTCGCCCAGCCGGGTCAGATACCGGATAAAGCCGAGGTCGGGCAACTGATCAAGGGTTTTGCTCAGTCGGTCGCTGATCAACTGGAGCACTTTCAACTGATGCATGACGCTTCGCCCGCAACGGTAGGCCAGCATGCAAAAGCGGACAAGGCGACGCTTGCCGTCAGTCAGACTGCCCTTGGCGAATACGCCGGTCGTGCAAGCAAGGCAATCGGCGAAGGCCTGAGCAACAGCATCGCGTCGCTGGATGAGCACATCAGTGCGCTGGATCTCACTCTGCAAGATGCCGAACAGGGCAACAAGGAGTCTCTGCACGCTGACAGGCAGGCGCTGGTCGACGCCAAAACCACCCTGGTAGGTTTGCACGCCGATTTCGTCAAGTCGCCGGAGGCCAAGCGCCTTGCTTCGGTCGCCGCACATACGCAACTGGACAACGTCGTCAGCGATCTCGTCACTGCCCGTAACACGGTGGGTGGCTGGAAAGGTGCAGGGCCGATTGTCGCGGCTGCGGTTCCGCAGTTCTTGTCTTCAATGACACACTTGGGTTATGTGCGTTTGTCCACCAGCGACAAGCTGCGAGACACGATTCCCGAGACCAGCAGCGACGCCAACATGCTCAAGGCTTCGATAATCGGGATGGTGGCGGGCATTGCTCACGAGACGGTCAACAGCGTGGTCAAGCCGATGTTTCAGGCCGCCTTGCAGAAGACTGGCCTCAACGAACGCCTGAACATGGTGCCAATGAAGGCTGTGGATACCAATACGGTTATTCCTGACCCCTTCGAGCTGAAAAGCGAACACGGTGAGCTGGTCAAAAAAACGCCCGAGGAAGTCGCTCAGGACAAGGCGTTCGTGAAAAGTGAACGCGCGCTGCTGAACCAGAAGAAGGTTCAGGGTTCGTCCACCCATCCGGTAGGTGAGCTGATGGCTTACAGTGCCTTCGGTGGTTCTCAGGCTGTGCGCCAGATGCTCAACGATGTTCACCAGATCAATGGGCAGACGCTGAGTGCAAGAGCTCTGGCATCCGGTTTTGGCGGGGCGGTGTCTGCCAGTTCGCAAACGCTGCTGCAATTGAAGTCGAATTATGTCGACCCGCAAGGGCGCAAAATTCCGGTATTTACCCCGGACCGCGCCGAGAGCGATCTGAAAAAGGACCTGCTCAAAGGTATGGACCTGCGCGAGCCGTCGGTACGCACCACGTTCTACAGCAAGGCTCTTTCGGGTATTCAGAGTTCTGCACTGACCTCGGCACTGCCGCCTGTGACCGCTCAGGCTGAAGGCGCAAGTGGCACGCTCAGTGCGGGGGCTATTTTGCGCAACATGGCCCTGGCAGCGACGGGTTCGGTGTCCTATCTGTCCACGTTGTACACCAACCAGTCGGTTACCGCAGAAGCCAAGGCGTTGAAAGCGGCAGGCATGGGCGGTGCAACACCTATGCTGGACCGTACCGAGACGGCTTTGAATAACATCCGTCATCCGAACAGGGAGTCTCTGCCACATACGTTCCAGAAGAGCACGTTGAGCGGTATCCCACGAGTCGCGGAAAACGCCTATCACATGGGACGAGGCGCATTGCAGTTGCCTACCCAGATGGCCGTGGATACGGTTCGGGTCGTGGATGAAGGTGTGTTGAACGCAGTCGCGTCAGCACGCGAGGCGCTTAAGCAGCCGACAAAAGACGATGACGCATTGAGGGCACTTGAAGAGGGCTTGCTTGACCCGCGTTAA
Protein sequence:
MISSRIGGAGGVELSRVNQQHDTVPAQTAHPNAVTAGMNPPLTPDQSGSHATESSSAGAARLNVAARHTQLLQAFKAEHGTAPVSGAPMISSRAALLIGSLLQAEPLPFEVMAEKLSPERYQLKQFQGSDLQQRLEKFAQPGQIPDKAEVGQLIKGFAQSVADQLEHFQLMHDASPATVGQHAKADKATLAVSQTALGEYAGRASKAIGEGLSNSIASLDEHISALDLTLQDAEQGNKESLHADRQALVDAKTTLVGLHADFVKSPEAKRLASVAAHTQLDNVVSDLVTARNTVGGWKGAGPIVAAAVPQFLSSMTHLGYVRLSTSDKLRDTIPETSSDANMLKASIIGMVAGIAHETVNSVVKPMFQAALQKTGLNERLNMVPMKAVDTNTVIPDPFELKSEHGELVKKTPEEVAQDKAFVKSERALLNQKKVQGSSTHPVGELMAYSAFGGSQAVRQMLNDVHQINGQTLSARALASGFGGAVSASSQTLLQLKSNYVDPQGRKIPVFTPDRAESDLKKDLLKGMDLREPSVRTTFYSKALSGIQSSALTSALPPVTAQAEGASGTLSAGAILRNMALAATGSVSYLSTLYTNQSVTAEAKALKAAGMGGATPMLDRTETALNNIRHPNRESLPHTFQKSTLSGIPRVAENAYHMGRGALQLPTQMAVDTVRVVDEGVLNAVASAREALKQPTKDDDALRALEEGLLDPR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 75214.1 | 712 | 6.72 | -0.232 | 29.01 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q84L32
|
Probable ubiquitin receptor RAD23a
|
RAD23A
|
Arabidopsis thaliana (related: thale cress)
|
MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVPASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIPATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED
|
|
F4IHF0
|
MAR-binding filament-like protein
|
Arabidopsis thaliana (related: thale cress)
|
MATTTLSSFSLSLPQLLHKPTKPLPFLFLLPRFNRRFRSLTITSSSTTSSNNFSSNCGDDGFSLDDFTLHSDSRSPKKCVLSDLIQEIEPLDVSLIQKDVPVTTLDAMKRTISGMLGLLPSDRFQVHIESLWEPLSKLLVSSMMTGYTLRNAEYRLFLEKNLDMSGGGLDSHASENTEYDMEGTFPDEDHVSSKRDSRTQNLSETIDEEGLGRVSSEAQEYILRLQSQLSSVKKELQEMRRKNAALQMQQFVGEEKNDLLDYLRSLQPEKVAELSEPAAPEVKETIHSVVHGLLATLSPKMHSKFPASEVPPTETVKAKSDEDCAELVENTSLQFQPLISLTRDYLARLLFWLEELPSSTSLSLAC
|
|
|
F4IXW2
|
Brefeldin A-inhibited guanine nucleotide-exchange protein 5
|
BIG5
|
Arabidopsis thaliana (related: thale cress)
|
MAAGGFLTRAFDTMLKESGGKKFPDLQKAIQAYQDGSKVVTQAAPSSIVESSQAEGGGEKTGVEADEPQKVTSAEVAQQASQSKSETINVSLANAGHTLGGAEVELVLKPLRLAFETKNLKIFDAALDCLHKLIAYDHLEGDPGLDGGKNSAPFTDILNMVCSCVDNSSPDSTVLQVLKVLLTAVASGKFKVHGEPLLGVIRVCYNIALNSKSPINQATSKAMLTQMISIVFRRMETDIVSASSTVSQEEHVSGDTSSPKNEEITAADENEKEMTLGDALTQAKDTTLASVEELHTLVGGADIKGLEAALDKAVHLEDGKKIKRGIELESMSIGQRDALLVFRTLCKMGMKEDSDEVTTKTRILSLELLQGMLEGVSHSFTKNFHFIDSVKAYLSYALLRASVSQSSVIFQYASGIFSVLLLRFRDSLKGEIGIFFPIIVLRSLDNSECPNDQKMGVLRMLEKVCKDPQMLVDVYVNYDCDLEAPNLFERMVTTLSKIAQGSQSADPNPAMASQTASVKGSSLQCLVNVLKSLVDWEKIRREAENSTRNANEDSASTGEPIETKSREDVPSNFEKAKAHKSTMEAAISEFNRNSVKGVEYLIANKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEFPLAVMHAYVDSMKFSEMKFHSAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFTRMNATNDPEDCAPTELLEEIYDSIVQEEIKLKDDDTMKKLSSQRPGGEERGGLVSILNLGLPKRISAADAKSETEDIVRKTQEIFRKHGVKRGVFHTVEQVDIIRPMVEAVGWPLLAAFSVTMEVGDNKPRILLCMEGFKAGIHIAYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRILLGLCDSEPDTLQDTWNAVLECVSRLEFIISTPGIAATVMHGSNQISRDGVVQSLKELAGRPAEQVFVNSVKLPSESVVEFFTALCGVSAEELKQSPARVFSLQKLVEISYYNIARIRMVWARIWSVLAEHFVSAGSHHDEKIAMYAIDSLRQLGMKYLERAELTNFTFQNDILKPFVIIMRNTQSQTIRSLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDEVESIVEKSFENVEQVILEHFDQVIGDCFMDCVNCLIRFANNKASDRISLKAIALLRICEDRLAEGLIPGGVLKPVDGNEDETFDVTEHYWFPMLAGLSDLTSDYRPEVRNCALEVLFDLLNERGNKFSTPFWESIFHRILFPIFDHVSHAGKESLISSGDVKFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKSDQTVVSISLGALVHLIEVGGHQFSEGDWDMLLKSIRDASYTTQPLELLNALSFDNPKKNLVLAGDIEADASDSPRVDRNPDDIKDNGKVSAQASPRIGTHGTSLESGIPPKADGSEGRPSSSGRAQKDVDDVNLQRSQTFGQRFMDNLFLRNLTSQPKSSVAEVTVPSSPYKHEDPTEPDSREEESPALGAIRGKCITQLLLLGAINSIQQKYWSNLKTPQKIAIMDILFSFIEFASSYNSYSNLRTRMNHIPTERPPLNLLRQELEGTTIYLDVLQKTTSGLADDASNSEDRLEGAAEEKLVSFCEQVLKETSDLQSTLGETTNMDVHRVLELRSPVIVKVLEGMCFMNNTIFRKHMREFYPLLTRLVCCEQMEIRGALANLFKAQLKPLLQQ
|
|
O82240
|
Adenine nucleotide alpha hydrolases-like superfamily protein
|
Arabidopsis thaliana (related: thale cress)
|
MATGDGKSVMVVGVDDSEQSTYALEWTLDRFFAPYAPNYPFKLFIVHAKPNAVSAVGLAGPGTAEVVPYVDADLKHTAAKVVEKAKAICQSRSVHGAVIEVFEGDARNILCEVVDKHHASILVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVKKPKIKV
|
|
|
P48348
|
14-3-3-like protein G-BOX factor 14 kappa
|
GRF8
|
Arabidopsis thaliana (related: thale cress)
|
MATTLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA
|
|
Q1G3U6
|
Plant cysteine oxidase 3
|
PCO3
|
Arabidopsis thaliana (related: thale cress)
|
MLSRLFKAGEKVLSNLVSKKDIYMASRNQEKSPKVQELYDLCKETFTGKAPSPASMAIQKLCSVLDSVSPADVGLEEVSQDDDRGYGVSGVSRFNRVGRWAQPITFLDIHECDTFTMCIFCFPTSSVIPLHDHPEMAVFSKILYGSLHVKAYDWVEPPCIITQDKGVPGSLPARLAKLVSDKVITPQSEIPALYPKTGGNLHCFTALTPCAVLDILSPPYKESVGRSCSYYMDYPFSTFALENGMKKVDEGKEDEYAWLVQIDTPDDLHMRPGSYTGPTIRV
|
|
Q9FJZ7
|
AT5G66420 protein
|
Arabidopsis thaliana (related: thale cress)
|
MKGETYRVFCVGTADTKLDELRFLAGSVRSNIGAFSKNSSSKVEVVIVDVSAGADQKQIDNVADFAFVTREEVLSCYIGSNQEEKPVKLPDDRGEAVGVMSKCLENFLRQAFEDNSLAGAIGLGGSGGTSLISSAFRSLPIGIPKVIVSTVASGQTEPYVGTSDLVLIPSLVDVCGINSVSRVVFSNAGASFAGMVVGRLELFRSSPSDNGKCTVGITMFGVTTPCVNAVQEILTREGYETLVFHATGVGGRAMESLVKEGFIQGVMDITTTEVADHLVGGVMACDSSRFDITIEKGIPLVLSVGALDMVNFGGKDTIPSHFQTRKIHVHNEQVSLIRTTAEENKKFARFIADKLNKSTSKVRVCIPEKGLSALDAPGKPFCDPEATGALINELQGLIQTNDDRQVNIYSHHINDPEFAEALVASFLEICPKTYAQIKPSETTSTKPSTGEHDDGHVRSRLERIPYSPKEFPNAKPETLERTQAILGRLRDQIEKGIPIIGGGAGTGISAKFEEAGGIDLIVIYNSGRFRMAGRGSLAGLLPFADANAVVLEMANEVLPVVKAVPVLAGVCATDPFRRMDYFLKQLESIGFVGVQNFPTVGLFDGNFRQNLEETGMGYGLEVKMISEAHKMGLLTTPYAFNPKEGEEMAKAGADIIVAHMGLTTSGNIGAKTAVSVEESVVRVQAIADAARRFNPDIIVLCHGGPISGPEEAEFVLKRTQGCVHGFYGASSMERLPVEQAITNTVQKYKSISIK
|
|
|
Q9FMG6
|
Dbj|BAA96220.1
|
MSJ1.2
|
Arabidopsis thaliana (related: thale cress)
|
MEEQFGGSDERWKGSLENITEMASNLDSLQKLLLKKAVFVEEDTFSRASLVSEQARTIKVLEQRVQTLERELDAAITAAAHARSEKRQAESSQKAAESRAQDVTKELENTTKVFKLHMEELRGMQEQISKRDNEIKLLEAIIQTLGGKERLGKSDVNG
|
External Links
Interpro:
Pfam:
SMART:
KEGG: pst:PSPTO_1375
PRINTS: