Effector profile
| PlantPEAD ID: PlantPEAD00076 | Uniprot ID: G3XDB9 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: HopAA1-1 | NCBI Gene ID: AE016853 | |
| Entry name: G3XDB9_PSESM | Protein name: Type III effector HopAA1-1 | |
| DOI: 10.1094/MPMI-22-11-1341 | ||
Gene/Protein information
Gene sequence:
ATGCACATCAACCGACGCGTCCAACAACCGCCTGTGACTGCGACGGATAGCTTTCGGACAGCGTCCGACGCGTCTCTTGCCTCCAGCTCTGTGCGATCTGTCAGCTCCGATCAGCAACGCGAGATAAATGCGATTGCCGATTACCTGACAGATCATGTGTTCGCTGCGCATAAACTGCCGCCGGCCGATTCGGCTGATGGCCAAGCTGCAGTTGACGTACACAATGCGCAGATCACTGCGCTGATCGAGACGCGCGCCAGCCGCCTGCACTTCGAAGGGGAAACCCCGGCAACCATCGCCGACACCTTCGCCAAGGCGGAAAAGCTCGACCGATTGGCGACGACTACATCAGGCGCGTTGCGGGCGACGCCCTTTGCCATGGCCTCGTTGCTTCAGTACATGCAGCCTGCGATCAACAAGGGCGATTGGCTGCCGGCTCCGCTCAAACCGCTGACCCCGCTCATTTCCGGAGCGCTGTCGGGCGCCATGGACCAGGTGGGCACCAAGATGATGGACCGCGCGACGGGTGATCTGCATTACCTGAGCGCCTCGCCGGACAGGCTCCACGATGCGATGGCCGCTTCGGTGAAGCGCCACTCGCCAAGCCTTGCTCGACAGGTTCTGGACACGGGGGTTGCGGTTCAGACGTACTCGGCGCGCAACGCCGTACGTACCGTATTGGCTCCGGCACTGGCGTCCAGACCCGCCGTGCAGGGTGCTGTGGACCTTGGTGTATCGATGGCGGGTGGTCTGGCTGCCAACGCAGGCTTTGGCAACCGCCTGCTCAGTGTGCAGTCGCGTGATCACCAGCGTGGCGGTGCATTAGTGCTCGGTTTGAAGGATAAAGAGCCCAAGGCTCAACTGAGCGAAGAAAACGACTGGCTCGAGGCTTATAAAGCAATCAAATCGGCCAGCTACTCGGGTGCGGCGCTCAACGCTGGCAAGCGGATGGCCGGTCTGCCACTGGATATGGCGACCGACGCAATGGGTGCGGTAAGAAGCCTGGTGTCAGCGTCCAGCCTGACCCAAAACGGTCTGGCCCTGGCGGGTGGCTTTGCAGGGGTAGGCAAGTTGCAGGAGATGGCGACGAAAAATATCACCGACCCGGCGACCAAGGCCGCGGTCAGTCAGTTGACCAACCTGGCAGGTTCGGCAGCCGTTTTCGCAGGCTGGACCACGGCCGCGCTGACAACCGATCCCGCGGTGAAAAAAGCCGAGTCGTTCATACAGGACACGGTGAAATCGACTGCATCCAGTACCACAGGCTACGTAGCCGACCAGACCGTCAAACTGGCGAAGACCGTCAAAGACATGGGCGGGGAGGCGATCACCCATACCGGCGCCAGCTTGCGCAATACGGTCAATAACCTGCGTCAACGCCCGGCTCGTGAAGCTGATATAGAAGAGGGGGGCACGGCGGCTTCTCCAAGTGAAATACCGTTTCGGCCTATGCGGTCGTAA
Protein sequence:
MHINRRVQQPPVTATDSFRTASDASLASSSVRSVSSDQQREINAIADYLTDHVFAAHKLPPADSADGQAAVDVHNAQITALIETRASRLHFEGETPATIADTFAKAEKLDRLATTTSGALRATPFAMASLLQYMQPAINKGDWLPAPLKPLTPLISGALSGAMDQVGTKMMDRATGDLHYLSASPDRLHDAMAASVKRHSPSLARQVLDTGVAVQTYSARNAVRTVLAPALASRPAVQGAVDLGVSMAGGLAANAGFGNRLLSVQSRDHQRGGALVLGLKDKEPKAQLSEENDWLEAYKAIKSASYSGAALNAGKRMAGLPLDMATDAMGAVRSLVSASSLTQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNLAGSAAVFAGWTTAALTTDPAVKKAESFIQDTVKSTASSTTGYVADQTVKLAKTVKDMGGEAITHTGASLRNTVNNLRQRPAREADIEEGGTAASPSEIPFRPMRS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 50709.3 | 486 | 9.06 | -0.171 | 43.33 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pst:PSPTO_1372
PRINTS: