Effector profile
PlantPEAD ID: PlantPEAD00079 Uniprot ID: Q8RSY1 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tomato (strain ATCC BAA-871 / DC3000) Other name: Pseudomonas syringae tomato
Gene name: AvrPtoB(hopAB2) NCBI Gene ID: AY074795
Entry name: HPAB2_PSESM Protein name: Effector protein HopAB2
DOI: 10.1093/emboj/cdg006
Gene/Protein information
Gene sequence:
ATGGCGGGTATCAATAGAGCGGGACCATCGGGCGCTTATTTTGTTGGCCACACAGACCCCGAGCCAGTATCGGGGCAAGCACACGGATCCGGCAGCGGCGCCAGCTCCTCGAACAGTCCGCAGGTTCAGCCGCGACCCTCGAATACTCCCCCGTCGAACGCGCCCGCACCGCCGCCAACCGGACGTGAGAGGCTTTCACGATCCACGGCGCTGTCGCGCCAAACCAGGGAGTGGCTGGAGCAGGGTATGCCTACAGCGGAGGATGCCAGCGTGCGTCGTAGGCCACAGGTGACTGCCGATGCCGCAACGCCGCGTGCAGAGGCAAGACGCACGCCGGAGGCAACTGCCGATGCCAGCGCACCGCGTAGAGGGGCGGTTGCACACGCCAACAGTATCGTTCAGCAATTGGTCAGTGAGGGCGCTGATATTTCGCATACTCGTAACATGCTCCGCAATGCAATGAATGGCGACGCAGTCGCTTTTTCTCGAGTAGAACAGAACATATTTCGCCAGCATTTCCCGAACATGCCCATGCATGGAATCAGCCGAGATTCGGAACTCGCTATCGAGCTCCGTGGGGCGCTTCGTCGAGCGGTTCACCAACAGGCGGCGTCAGCGCCAGTGAGGTCGCCCACGCCAACACCGGCCAGCCCTGCGGCATCATCATCGGGCAGCAGTCAGCGTTCTTTATTTGGACGGTTTGCCCGTTTGATGGCGCCAAACCAGGGACGGTCGTCGAACACTGCCGCCTCTCAGACGCCGGTCGACAGGAGCCCGCCACGCGTCAACCAAAGACCCATACGCGTCGACAGGGCTGCGATGCGTAATCGTGGCAATGACGAGGCGGACGCCGCGCTGCGGGGGTTAGTACAACAGGGGGTCAATTTAGAGCACCTGCGCACGGCCCTTGAAAGACATGTAATGCAGCGCCTCCCTATCCCCCTCGATATAGGCAGCGCGTTGCAGAATGTGGGAATTAACCCAAGTATCGACTTGGGGGAAAGCCTTGTGCAACATCCCCTGCTGAATTTGAATGTAGCGTTGAATCGCATGCTGGGGCTGCGTCCCAGCGCTGAAAGAGCGCCTCGTCCAGCCGTCCCCGTGGCTCCCGCGACCGCCTCCAGGCGACCGGATGGTACGCGTGCAACACGATTGCGGGTGATGCCGGAGCGGGAGGATTACGAAAATAATGTGGCTTATGGAGTGCGCTTGCTTAACCTGAACCCGGGGGTGGGGGTAAGGCAGGCTGTTGCGGCCTTTGTAACCGACCGGGCTGAGCGGCCAGCAGTGGTGGCTAATATCCGGGCAGCCCTGGACCCTATCGCGTCACAATTCAGTCAGCTGCGCACAATTTCGAAGGCCGATGCTGAATCTGAAGAGCTGGGTTTTAAGGATGCGGCAGATCATCACACGGATGACGTGACGCACTGTCTTTTTGGCGGAGAATTGTCGCTGAGTAATCCGGATCAGCAGGTGATCGGTTTGGCGGGTAATCCGACGGACACGTCGCAGCCTTACAGCCAAGAGGGAAATAAGGACCTGGCGTTCATGGATATGAAAAAACTTGCCCAATTCCTCGCAGGCAAGCCTGAGCATCCGATGACCAGAGAAACGCTTAACGCCGAAAATATCGCCAAGTATGCTTTTAGAATAGTCCCCTGA
Protein sequence:
MAGINRAGPSGAYFVGHTDPEPVSGQAHGSGSGASSSNSPQVQPRPSNTPPSNAPAPPPTGRERLSRSTALSRQTREWLEQGMPTAEDASVRRRPQVTADAATPRAEARRTPEATADASAPRRGAVAHANSIVQQLVSEGADISHTRNMLRNAMNGDAVAFSRVEQNIFRQHFPNMPMHGISRDSELAIELRGALRRAVHQQAASAPVRSPTPTPASPAASSSGSSQRSLFGRFARLMAPNQGRSSNTAASQTPVDRSPPRVNQRPIRVDRAAMRNRGNDEADAALRGLVQQGVNLEHLRTALERHVMQRLPIPLDIGSALQNVGINPSIDLGESLVQHPLLNLNVALNRMLGLRPSAERAPRPAVPVAPATASRRPDGTRATRLRVMPEREDYENNVAYGVRLLNLNPGVGVRQAVAAFVTDRAERPAVVANIRAALDPIASQFSQLRTISKADAESEELGFKDAADHHTDDVTHCLFGGELSLSNPDQQVIGLAGNPTDTSQPYSQEGNKDLAFMDMKKLAQFLAGKPEHPMTRETLNAENIAKYAFRIVP
Protein structure:
PDB(X-ray)(3HGL)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59452.6 553 10.18 -0.551 52.57
Plant infestation information
Experimental plant: Solanum lycopersicum (related: tomato)
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana Disease name: Bacterial speck
Host classification: Eudicots NCBI Species: 4081, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q40234
Protein kinase
Pto
Solanum lycopersicum (related: tomato)
MGSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI
P62980
Ubiquitin-ribosomal protein eS31 fusion protein
UBI3
Solanum lycopersicum (related: tomato)
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
Q9FL28
LRR receptor-like serine/threonine-protein kinase FLS2
FLS2
Arabidopsis thaliana (related: thale cress)
MKLLSKTFLILTLTFFFFGIALAKQSFEPEIEALKSFKNGISNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDLRNNLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNLSAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRMNLTFISIGRNHFTGEIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKKPLKPCTIKQKSSHFSKRTRVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSALKLKRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYTEAKTLSQLKHRNLVKILGFAWESGKTKALVLPFMENGNLEDTIHGSAAPIGSLLEKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKLRGKANSFREDRNEDREV
Q94F62
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
BAK1
Arabidopsis thaliana (related: thale cress)
MERRLMIPCFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTKLTPLPASPPPPISPTPPSPAGSNRITGAIAGGVAAGAALLFAVPAIALAWWRRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR
Q40126
Fen kinase
Fen
Solanum lycopersicum (related: tomato)
MGSKYSKATNSINDASNLSYGVPFENYRVPFVDLEEATNNFDDNFFIGEGGFGKVYRGVLRDGTKVALKKHKPESSQGIEEFETEIEILSFCSHPHLVSLIGFCDERNEMILIYDYMENGNLKSHLYGSDLPSMSWEQRLEICIGAARGLHYLHKNAVIHRDVKCTNILLDENFVPKITDFGISKTMPELDQTHLSTVVRGNIGYIAPEYALWGQLTEKSDVYSFGVVLFEVLCARPALDRSEIMSLDDETQKMGQLEQIVDPTIAAKIRPESLRMFGETAIKCLAPSSKNRPSMGDVLWKLEYALCLQEPTIQDDPE
Q9LLD3
LpimPth3
Solanum lycopersicum (related: tomato)
MGSKYSKATNSISDASNSRYGVPFENYRVPLVDLEEATNNFDDNFFIAEGGFGKVYRGVLRDGTKVALKRHNCDSQQSIEEFRTEIEILSRRSHPHLVSLIGYCDGRNEMILIYDYMENGNLKSHLYGSDLPSMSWEQRLEICIGAARGLHYLHTNGVMHRDVKSSNILLDENFVPKITDFGLSKTRPQLYQTHVSTDVKGTFGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPSEMVNLAEWAVESHNNGQLEQIIDPNLAAKIRPESLRKFGETAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI
P62980
Ubiquitin-ribosomal protein eS31 fusion protein
UBI3
Solanum lycopersicum (related: tomato)
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
Q9SNA0
Leucine-rich repeat protein kinase family protein
F18L15.90
Arabidopsis thaliana (related: thale cress)
MRNCYNLSVHKETKYLIRVTSNYGNYDGRNEPPRFDLYLGPNFWVTIDLGKHVNGDTWKEIIHIPKSNSLDVCLIKTGTTTPIISTLELRSLPKYSYNAISGSLKSTLRAFLSESTEVIRYPNDFYDRMWVPHFETEWKQISTNLKVNSSNGYLLPQDVLMTAAIPVNTSARLSFTENLEFPHDELYLYFHFSEVQVLQANQSREFSILWNGMVIYPDFIPDYLGAATVYNPSPSLCEVGKCLLELERTQKSTLPPLLNAIEVFTVMNFPQSETNDDDVIAITKIKDTHRLNRTSWQGDPCVPQLFSWAGLSCIDTNVSTPPRIISLNLSSSGLTGNIATGIQNLTKLQKLDLSNNNLTGVVPEFLANMKSLLFIDLRKNKLNGSIPKTLLDRKKKGLQLFVDGDDDKGDDNKCLSGSCVPKMKFPLMIVALAVSAVVVIAVVMILIFLFRKKKKSSLGITSAAISEESIETKRRRFTYSEVVEMTKNFQKTLGEGGFGTVYYGNLNGSEQVAVKVLSQSSSQGYKHFKAEVELLLRVHHINLVSLVGYCDERNHLALIYECMSNGDLKDHLSGKKGNAVLKWSTRLRIAVDAALGLEYLHYGCRPSIVHRDVKSTNILLDDQLMAKIADFGLSRSFKLGEESQASTVVAGTLGYLDPEYYRTCRLAEMSDVYSFGILLLEIITNQNVIDHAREKAHITEWVGLVLKGGDVTRIVDPNLDGEYNSRSVWRALELAMSCANPSSEHRPIMSQVVIDLKECLNTENSMKIKKNDTDNDGSLELSSSDTEAVPCAR
A8R7E6
Chitin elicitor receptor kinase 1
CERK1
Arabidopsis thaliana (related: thale cress)
MKLKISLIAPILLLFSFFFAVESKCRTSCPLALASYYLENGTTLSVINQNLNSSIAPYDQINFDPILRYNSNIKDKDRIQMGSRVLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATNIPLSATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSSGVSADILQRYNPGVNFNSGNGIVYVPGRDPNGAFPPFKSSKQDGVGAGVIAGIVIGVIVALLLILFIVYYAYRKNKSKGDSFSSSIPLSTKADHASSTSLQSGGLGGAGVSPGIAAISVDKSVEFSLEELAKATDNFNLSFKIGQGGFGAVYYAELRGEKAAIKKMDMEASKQFLAELKVLTRVHHVNLVRLIGYCVEGSLFLVYEYVENGNLGQHLHGSGREPLPWTKRVQIALDSARGLEYIHEHTVPVYVHRDIKSANILIDQKFRAKVADFGLTKLTEVGGSATRGAMGTFGYMAPETVYGEVSAKVDVYAFGVVLYELISAKGAVVKMTEAVGEFRGLVGVFEESFKETDKEEALRKIIDPRLGDSYPFDSVYKMAELGKACTQENAQLRPSMRYIVVALSTLFSSTGNWDVGNFQNEDLVSLMSGR
P93002
Regulatory protein NPR1
NPR1
Arabidopsis thaliana (related: thale cress)
MDTTIDGFADSYEISSTSFVATDNTDSSIVYLAAEQVLTGPDVSALQLLSNSFESVFDSPDDFYSDAKLVLSDGREVSFHRCVLSARSSFFKSALAAAKKEKDSNNTAAVKLELKEIAKDYEVGFDSVVTVLAYVYSSRVRPPPKGVSECADENCCHVACRPAVDFMLEVLYLAFIFKIPELITLYQRHLLDVVDKVVIEDTLVILKLANICGKACMKLLDRCKEIIVKSNVDMVSLEKSLPEELVKEIIDRRKELGLEVPKVKKHVSNVHKALDSDDIELVKLLLKEDHTNLDDACALHFAVAYCNVKTATDLLKLDLADVNHRNPRGYTVLHVAAMRKEPQLILSLLEKGASASEATLEGRTALMIAKQATMAVECNNIPEQCKHSLKGRLCVEILEQEDKREQIPRDVPPSFAVAADELKMTLLDLENRVALAQRLFPTEAQAAMEIAEMKGTCEFIVTSLEPDRLTGTKRTSPGVKIAPFRILEEHQSRLKALSKTVELGKRFFPRCSAVLDQIMNCEDLTQLACGEDDTAEKRLQKKQRYMEIQETLKKAFSEDNLELGNSSLTDSTSSTSKSTGGKRSNRKLSHRRR