Effector profile
PlantPEAD ID: PlantPEAD00081 Uniprot ID: Q79LY0 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tomato strain ATCC BAA-871 / DC3000 Other name: Pseudomonas syringae tomato
Gene name: HopPtoD2 NCBI Gene ID: AY198373
Entry name: HOPD2_PSESM Protein name: Effector protein hopD2
DOI: 10.1046/j.1365-2958.2003.03588.x
Gene/Protein information
Gene sequence:
ATGAATCCCCTGCAACCTATTCAGCACAGCATTACAAATTCCCAAATGAGTGGTGGTCAGCAATTAGAGGCGGAGGGCTCTCAGGCCCACAATTCCTATTCCCATCCTGACAGGATTTCGCTTTCCCAATTGAGCCAAAGCGCTCACCTAGCTCTAGATCACCTTTCAACTCAGCCTAATACCGATCACCAACGCGTTGCATCACTGGTACGCAACGCTGTGCAGGACGGTAAGTTCCAACTTCAATCCAGTAACGACACGCAAGTAACCTATAAAACTTCAGTCTGTCCGCCAGCTAACGCCGACACCATGGGGGCCGCCCACTTAATTAATAACGAGCTGACGGTTCAGGCCCGATTAAATGATCAACTTGAGTACGACATCGTCAGCGCTCATTTGTATGGCCCTTCGGAAGCCATATCCATCGATGCATCCAGTCCTCCCTCGGCCAACGATCTAGCGTCCTCTGGCTTGAGCGAACGTACGCATCTAGGTATGAATCGTGTCCTCTTACGCTACGCGGTGCCCCCTCGGGAAACCGAAGACCAATGTGTTATGGTGATCGACAAAATGCCCCCCCCCAAACACGGCAAAATGTCTTTCTTCCGTACCACTAATGACTTGAGCAAACTGCCTTTGGGAATGGAGACGGGCGGGTTGTCCGACCTGAAATTGGCTGGTTGTGAACGTATTTCTTCCGTCGAGCAGGTGAAGAGTATCCGCGCAGCGCTTGGAGGCGGGCCGCTCACCGTACTAGATCTGCGCGAAGAATCTCATGCGATTGTCAACGGTTTGCCTATCACCTTACGTGGCCCGATGGATTGGGCCAACGCCGGCCTATCCCAGGTTGACGGAGCGGCACGTGAAAGTGCCATGATTACAGAACTGAAGCGCACTAAGTCTTTAACGTTGGTCGATGCCAATTATGTAAAAGGTAAAAAAAGTAATCCTCAAACGACAGAACTGAAAAATTTGAATGTCCGGAGCGAGCGAGAAGTCGTTACAGAGGCCGGCGCGACCTATCGCCGCGTGGCCATTACCGACCATAACAGGCCTAGTCCGGAAGCGACCGACGAGCTAGTAGACATCATGCGCCACTGCCTGCAGGCAAATGAGTCGCTAGTTGTGCACTGTAACGGCGGTCGGGGCCGTACTACCACGGCTATGATAATGGTCGACATGCTTAAGAACGCTCGTAACCATTCCGCAGAAACCCTCATCACGCGTATGGCCAAGCTAAGCTATGACTACAACATGACGGATCTAGGCAGCATTTCTGCACTCAAGCGGCCATTCCTAGAGGACAGACTAAAATTTCTGCAGGCCTTTCACGACTATGCCCGCAACAACCCAAGCGGATTATCTCTTAATTGGACACAGTGGCGCGCAAAAATAGCGTTAGAATGA
Protein sequence:
MNPLQPIQHSITNSQMSGGQQLEAEGSQAHNSYSHPDRISLSQLSQSAHLALDHLSTQPNTDHQRVASLVRNAVQDGKFQLQSSNDTQVTYKTSVCPPANADTMGAAHLINNELTVQARLNDQLEYDIVSAHLYGPSEAISIDASSPPSANDLASSGLSERTHLGMNRVLLRYAVPPRETEDQCVMVIDKMPPPKHGKMSFFRTTNDLSKLPLGMETGGLSDLKLAGCERISSVEQVKSIRAALGGGPLTVLDLREESHAIVNGLPITLRGPMDWANAGLSQVDGAARESAMITELKRTKSLTLVDANYVKGKKSNPQTTELKNLNVRSEREVVTEAGATYRRVAITDHNRPSPEATDELVDIMRHCLQANESLVVHCNGGRGRTTTAMIMVDMLKNARNHSAETLITRMAKLSYDYNMTDLGSISALKRPFLEDRLKFLQAFHDYARNNPSGLSLNWTQWRAKIALE
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
51380 468 6.6 -0.451 37.62
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found)
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana Disease name: Bacterial speck
Host classification: Eudicots NCBI Species: 4081, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9FL28
LRR receptor-like serine/threonine-protein kinase FLS2
FLS2
Arabidopsis thaliana (related: thale cress)
MKLLSKTFLILTLTFFFFGIALAKQSFEPEIEALKSFKNGISNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDLRNNLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNLSAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRMNLTFISIGRNHFTGEIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKKPLKPCTIKQKSSHFSKRTRVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSALKLKRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYTEAKTLSQLKHRNLVKILGFAWESGKTKALVLPFMENGNLEDTIHGSAAPIGSLLEKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLMKLRGKANSFREDRNEDREV
Q8LAZ7
COP9 signalosome complex subunit 5a
CSN5A
Arabidopsis thaliana (related: thale cress)
MEGSSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS
C0LGT6
LRR receptor-like serine/threonine-protein kinase EFR
EFR
Arabidopsis thaliana (related: thale cress)
MKLSFSLVFNALTLLLQVCIFAQARFSNETDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGRRRERVISLNLGGFKLTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELGSLSKLAILDLSKNNLTGNFPASLGNLTSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSFSGGFPPALYNISSLESLSLADNSFSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLSGSIPLSFGKLRNLWWLGIRNNSLGNNSSSGLEFIGAVANCTQLEYLDVGYNRLGGELPASIANLSTTLTSLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDGAIPDISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGVFRNATAVSVFGNTNICGGVREMQLKPCIVQASPRKRKPLSVRKKVVSGICIGIASLLLIIIVASLCWFMKRKKKNNASDGNPSDSTTLGMFHEKVSYEELHSATSRFSSTNLIGSGNFGNVFKGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVKLITVCSSLDSEGNDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILSGCTSSGGSNAIDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELISIRSKFFSSKTTITESPRDAPQSSPQEWMLNTDMHTM
Q2HIK4
Prefoldin subunit 6
PFD6
Arabidopsis thaliana (related: thale cress)
MSSSTVRDLQRDLENKANDLGKIQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDAILQDMEEKQNNKRETIMKLQQRLQTIQAGKAKA
Q8L466
At1g24050/T23E23_11
Arabidopsis thaliana (related: thale cress)
MDPAGASVASAIGGEGEKFAVGNIYSVKVITGDEFRGIVMAYDPIPNFVFFEEGTKPRPGHLKNTRMVNASFITGLSYLGKTEDPLDSDNFSVDLNGLRAKEALAIRQAEADAERMGVGVTAEAQSIFDALSKTLPVQWENSDILVMKEVRVRSPYLSDCVFGGTDAANNRVKKVLELERRRLQLFGT