Effector profile
| PlantPEAD ID: PlantPEAD00084 | Uniprot ID: Q7PC62 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HopAE1 | NCBI Gene ID: BK000956 | |
| Entry name: HOAE1_PSEU2 | Protein name: Effector protein hopAE1 | |
| DOI: 10.1126/science.1203659 | ||
Gene/Protein information
Gene sequence:
ATGATGCCCTCTCAGATCACGCGCTCCTCTCATTCCTCATTGCCGGAGGTTGCTCCCGCGTCCGGCGATGCAGCCGGCGTTAGTGAGCAAACTCCGCAGCAGGCTCGTACCGTGGCGTTTTTTGCCTCCGGCGAGCTGGCCGTGGCATTTGGTCGCACCTCGACCGCGCCAGCGCAGGACTCTGTGCGTCTGTTGTCTGCTCTTCAGCGTGAGCTGGATAAACAGCAGCCGTCCTGGCCCACAGTTGCCCAGCTCTGCCACAGCCTGGCCGAGGTCGCCAAGACCGAGCAGGGTTGGCACCAACTTGCCAGCGAGGATCAGGCGCCGGCGCCGGCGCTGAAAGACCTGCTTGAGCGCTGTATTGGCCGGCTGGCCGATATGCCTGCTTCTCATGCATCTCACGACTCGCTGTCGCTGGCCTGCGAGGGGCTCAGGACGGCGCGGCTGCACCAATCCGTCGCTCGTTTGACTGCCCGGCCGCCCGCTCTGGCCCGGGCGATTCCGGATCTGCTGGCGTTGACTCATCTGGATCCCGAGACGCTGGGCGCAGAGCCCCCCGTTGTTTCGTCTTACACGCTCTTCAGCCATTTCGTTCACACGGCCAAGCAGCGTACTGCGGAGTTGAATGACAGCCTCCAGCGTCAACCCGAAGCGGTCGTCAGTCTGCTGCGCTCACATGCCGACACGCTCAATGACCTGGAGACGTTGCCCGGCGCATTGCAGGCATTGACCGAAAATTGCCAGGACGCGCCTGCCTGCAATGAATTGCGCGAGCTGGCGGAAGTGGTGGGGGCGCTGCTGCAGCTATTGCGCGAACACGGCATTTTGCCGAGGCTGGAAGCAATCTCCATCGAGCCAGGCGAAGCACCTGCACCTGGCCATGAGGCTGCCGAGCCCCGGCTGACGAGAAGCCAGGCATTGCTCAAGGCCGGCGGCAATCTGGTGCGCAAGTTTGATGCCTATGGGGCGCTCGCGCCAATGGACGACAAGGGGTTGCTGGCCTTGATGCGCACCCCGGCGCCACACCTGTCGCCCGATCAGATGCATGCCTTCCTGAACAAGCATGTGCTGCATCTCACGCAGGAACAACGCGATATCGTCAGCAATACCCCGTTGCCCTTCGCCCCTGAAGGAGACATCGAGGCCCGGTGCGGCATGGGGTTCGATGAAAAACTGCGGTTGGCGCTGGCCAACGGTTCGCTGGTATTGAGCGAGGAGCAACTGGCCCGTCTTGGTCATTTGCCCAGTGCTGCTACCACGACGTCCGACGTTGTGAAGACGCTGCTGGAAAAACCATCGTCGGCGCTGAGCGAAGCCGAGCGTGACATGTTGGGCGCAATCGTTCAGGCCAACGGCCAGGGTCAACTCGACGCCTGGCGCGCTCACAACGAACAGTTGCCTGCAGTGTTGAGCCGCTCGGGGCTACCCTCTGATGTGAAAGACGAGTTGCTCAGCCTTAACCAAAGCATGAATGCCGAACTGGGCACGCTCAAGAACGGTGCCTCGTTCAAGAGTCGCATCCTTGCAAGTCCGGCGATGCTGCTCGCGCTGGCACCCTTGCCACTGGCCGTGGCGTTCGTCAGCAAGGACAACTCCTACAGCTCATCGCTGGTTGCCCACTTCACCAAGAACGCAGTGTTCATGGCTGGCCTGATGATGAACGAGCTGACCAACGCGCGGACCAATGTCGATCACGGCCTGAACCGCTACTTCGTCACCGTGCTGGCCAACGCCATCGTGGCGCAGCCCACCTTTGCCAGGAACGAACACCTGCTGGAGCAGGTCGGCTTCGGTATCGCAACGGCCGTGGCATCGGGCGCAGCCACGCTGGGCGTATTCAACCGCGAATCGATCGTCGCCGCCTTCAAGCTCGCCAAGAGCAAGCTTTCGAGGCAAGACACCGGGAACGCCAGCATCCCGGAGGAAGACCATCTTGCCGTGGTCAGGCATTTCGACGTCAGCGAGCATTTTGCCCAGCAGATGAAAGTGGCGACCGAATTGTACAAGCAAGACAAAAGCATCACCGACATCATGAACTCGAGCCTGACGTACCTGGGCACCAAGAGCAGCGAGTTCCAGGCCAGGTTCGAAAGCGTCGATGCCCTGCGCGCAGGTCTGCAACTGGCCGAGGGGGAGCGCAAGGCGGACCCTGACTTCTACACCAAACTGGGCCTGGTGGCCCTGACGGCGAGTATCGGTGCGGCGCTGGTGATGTTGATGAAAAGCATGGTCGGCAAAGCCGATTACGCGGCGGACGGCGTCTGGTGCGTATCGGAGATGCTCAAGCTGGCCATGAACCCTGAAGTCGACATGCAAAAGGCGGTTCAGGTCTTCAAGGAAATCGTCGGCCTGAATCTGGTGATGACAGGGTTTCTGGGCGTCAACAAAGTCTGGAATTTTCTCGACAAGGGGATCAAAGGCTATGCCTCCGGTGCTGCGGTCCTGACCGCAGCCAACCTCACGCTTCCCGGTATGGTTGGAGAAGTGGCTGGCGCAGCAGCCGGCAAAGGCTTGAGCTACCTGACTGACAAAGGCAAGGCGGCGCATCAGGCTGGCAGGGCGGCTGCGTCCTGGGCCGGGAATTACGTCGGCACCTCGCGTCTGGGGAGCGCGGTCGGCACCCTGCAAACGGCAATTCCGGGCAGGATCGCAGGCGGGCAGGTAGTGGCGGGTCTCTACGACCGCTTCCGGTACCTGACCGGGTCGCACCCGACGCCGGCACAGCAAGCGGCTGGCGAGCCATAA
Protein sequence:
MMPSQITRSSHSSLPEVAPASGDAAGVSEQTPQQARTVAFFASGELAVAFGRTSTAPAQDSVRLLSALQRELDKQQPSWPTVAQLCHSLAEVAKTEQGWHQLASEDQAPAPALKDLLERCIGRLADMPASHASHDSLSLACEGLRTARLHQSVARLTARPPALARAIPDLLALTHLDPETLGAEPPVVSSYTLFSHFVHTAKQRTAELNDSLQRQPEAVVSLLRSHADTLNDLETLPGALQALTENCQDAPACNELRELAEVVGALLQLLREHGILPRLEAISIEPGEAPAPGHEAAEPRLTRSQALLKAGGNLVRKFDAYGALAPMDDKGLLALMRTPAPHLSPDQMHAFLNKHVLHLTQEQRDIVSNTPLPFAPEGDIEARCGMGFDEKLRLALANGSLVLSEEQLARLGHLPSAATTTSDVVKTLLEKPSSALSEAERDMLGAIVQANGQGQLDAWRAHNEQLPAVLSRSGLPSDVKDELLSLNQSMNAELGTLKNGASFKSRILASPAMLLALAPLPLAVAFVSKDNSYSSSLVAHFTKNAVFMAGLMMNELTNARTNVDHGLNRYFVTVLANAIVAQPTFARNEHLLEQVGFGIATAVASGAATLGVFNRESIVAAFKLAKSKLSRQDTGNASIPEEDHLAVVRHFDVSEHFAQQMKVATELYKQDKSITDIMNSSLTYLGTKSSEFQARFESVDALRAGLQLAEGERKADPDFYTKLGLVALTASIGAALVMLMKSMVGKADYAADGVWCVSEMLKLAMNPEVDMQKAVQVFKEIVGLNLVMTGFLGVNKVWNFLDKGIKGYASGAAVLTAANLTLPGMVGEVAGAAAGKGLSYLTDKGKAAHQAGRAAASWAGNYVGTSRLGSAVGTLQTAIPGRIAGGQVVAGLYDRFRYLTGSHPTPAQQAAGEP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 97210.8 | 914 | 6.03 | -0.053 | 35.99 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Brown spot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029378
Pfam: PF15457
SMART:
KEGG: psb:Psyr_4269
PRINTS: