Effector profile
| PlantPEAD ID: PlantPEAD00086 | Uniprot ID: Q4ZX85 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HopAA1 | NCBI Gene ID: CP000075 | |
| Entry name: Q4ZX85_PSEU2 | Protein name: Type III effector HopAA1 | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGCACATCAACCGAACCGGCAGCTCGCAGCCCAGCATCGAGCTGGAGCGCTTTTATTCCGCATCGCAATCATTGGCCTCCAGTTCCGTACGCGAGCTCAGCCCTGCCGAACACGCTAATCTGCAAGCCATTACCGATTACCTGAAAGATCATGTATTCGCTGCGCACAAACTGCCGTTGAGTGAGTCGGCCGTCGATCAGGATGCCGTTCATGCGCACAACGAGCAACTCGACAAGATCATCGATGCTCGCGCCAGACGCTTGCTGGACGAGGGCGAAACGCCTGCCACCATTGCCGACACCTTCGCCAAGGCGGAGAAGTTCGACAGGATGGCAACCACCGCTTCGATCACGCTGCGCGCCACGCCGTTTGCCGCTGCGTCGGTGCTGCAATACATGCAGCCTGCCATCAACAAGGGCGACTGGCTGCCGATGCCGCTCAAACCCCTGACGCCATTTGTGTCCGGGGCGCTGTCCGGGATCATGGATCAGGTCGGCACTACGGTCATGAATCGCGCCACGGGCAACCTGCACTACCTGAGTACCCCGCCTGAGAAACTGCATGATGCGATGGCGGCTTCCGTGAAGCGTCATTCGCCGGGTGTCATGCGTCAGGCGGTGGATCTGGGTATTGCCATCCAGGCTTACAGCGCGCGAAATGCGGTGCGTACCGTGCTGGCGCCAGCACTGGCATCCAGACCCGCCGTGCAGGGTGCGGTCGACATCAGCGTGTCGGCGGCAGGTGGCCTGGCGGCCAACGCGGGGTTCGGCAATCGTATGCACAGTGTGCAGGCGCGTGATCACTTGCGCGGCGGTGCGTTCGTGCTCGGCATCAAGGACCAGGAACCCAAGGCAGACTTGAGTGAAGAAACCGACTGGCTCGTGGCTTACAAAGCGATCAAGTCAGCCAGCTACTCCGGCGCGGCGCTGAACGCAGGCAAGCGGGTGGCTGGCCTGCCGCTGGACGTCGCCACCGACGGCCTGAAAGCGGTGAGAAGCCTGGTGTCGGCCACCGGTCTGGCGCAAAACGGGCTGGCCCTGGCAGGCGGCTTTGCCGGCGTGGGCAAATTGCAGGAGATGGCGACCAAAAATATCACTGATCCGGCCACCAAGGCGGCGGTCAGCCAACTGACCAATATGGCCGCCTCGACAGGCGTTTTTGCGGCCTGGACCACCGCAGCGGTCGCAACCGATCCCGCGGTGAAAAAAGCTGAGTCGTTCTTGCAGGATACGGTCAAATCGGCGGCGTCGAGTTCGACCAGCTATGTAGCTGACCAGACTGTCAAGCTGGCCAAGGCGGGCATTGACGCGAGTGGTGAGGCGATTGCTGCGACGGGGGCATCCTTGCTTGACACATTACGTCGTCGCAATGCTCGTGAGCCGGACATCGAAGAGGGTGGCATTGCAGCGGGTTCACCGAGCGCGGTGCCGTTCCAGCCAGGGCGCTCATAA
Protein sequence:
MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPLSESAVDQDAVHAHNEQLDKIIDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLRATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSGIMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAVDISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAIKSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPAVKKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQPGRS
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 50256.8 | 483 | 7.91 | -0.08 | 46.17 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Brown spot |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: psb:Psyr_1183
PRINTS: