Effector profile
PlantPEAD ID: PlantPEAD00087 Uniprot ID: Q4ZX82 Source: Database
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. syringae strain B728a Other name:
Gene name: HopM1 NCBI Gene ID: CP000075
Entry name: HOPM1_PSEU2 Protein name: Effector protein hopM1
DOI: 10.1093/nar/gkab1037
Gene/Protein information
Gene sequence:
ATGATTGGCACACGAGTCGGCGGATCAGGCAGTACCGAAATCGTTCAGGCGAACCAGCCGCAGCCGTCTGCCGCTGTCGCCCAGGCTCATCCACACGCGGTAAGCCCGAGCAGCAACCCGCCGCTGACCGCCAGCCAGTCGGCCGCGCAAGCGCCGGAAAGCTCGGCGGCCGGTGCCGCTCGCCTGCCAGTCGCGCCGCGACATCTGCCGACATTGGAGAAGTTTCGTGCCGAACAGCCCACCGTACAAGGCACTTCCACGCCGACTATCAGCGCTAACGCGGCCCTGCTGATCGGCAGTCTGTTGCAGTCTGAAAAACTGCCCTTCGAGGTCATGGCCGCCCGTTTGTCGCCTGAGCGTTATGCGTTGCAGCAGTTTCACGGCTCCGATTTACAGCAAATGCTCGGACGATTCGCTGAGCCAGGGCATCTGCCAGGCAAGGCCGAGACCGAACAACTGATCAAGGGCTTTGCCCGGTCGCTCGCAGACCAGCTGGAGCACTTCCAGCTCATGCATGACGCGACGGCTGAGGCATTCGGCCCCGGAGGGCTGCGCGACCGCAACACACTGGCGGTCAGTCAAGCGGCGCTTGGCGAATACGCCGGTCGGGCGAGTAAATCCATCGAAGCGGGGCTGAACCACAGTCTCGCGGTGCTGGACGAGCGCATCGCCGCGCTGGACAGCCAGTTGGAGGGCGCCACTGAGGACAGCAGACCGGTTTTGCTGATGGACAGGCAGGCGCTGGAAACGGCCAGGGCGATGCTGAGCGACCTGCACGTCGACTTCTGCAAATCGCCTGAAGCCAAGCGGTTGAGTGCCGTTGCCGCTCACACGCAAATGGATGCTCTGATCGACAAGCTGAACGTTGATCGCAGCTCGGTCGGCGGCTGGAAGGGGATCGGTCCGATCGTCGCGGCAGCGGTGCCGCAGTTTATGGTGTCCATGCTCCACCTGGGGTATATCCGCACGGCCACCAGTGACGCGATGAAAGATGCCGTTCCCGAAAAAAGCGCCGACGCCAGCATGAAGAGGGCCCTGGCCGTAGGACTGACTGCCGGGGTGGCTCACGAGGGCGTTACCAACCTCTTGAAGCCGATGGTGCAGGCCGGGTTTCAGAAAGCCGGCCTCAACGAGCGGCTGAATATGGTGCCGCTCAAGGGTATTGATACCGACTCGGTGATTCCCGACCCTTTCGAGTTGAAGAACGACAACGGCGCACTGGTCAGAAAAACGCCTGAGGAAGCCGCTGAGGACAAAGCCTTCGTCGCAAGCGAGCGAGCGGTTTTGAATCAGAAAAAGGTTCAGGTTTCGTCTACCCATCCACTGGGTGAGATGATCCCCTACGGCGCCTTTGGTGGCGGGCAGGCGGTACGCCAGATGCTCAATGATTTCAATCTGCTCAATGGCCAGACCCTGTCGGCCAGAGCGGTGACCTCCGGGATCGCCGGGGCCATATCAGCCACCACCCAGACCATTGCACAGCTGAACTCGACCTATGTCGATCCGCGCGGGCGCAAGATCCCGGTCTTCACCCCGGACCGCGCCAATGCCGACCTGGGCAAGGACCTGGCCAAAGGCCTGGACCTTCGCGAACCGGCGGTACGCACCGCGTTCTACAGCAAGGCTGTTTCAGGTGTGCAGAGCGCAGCGCTGAACGGCGCGCTACCATCGGTTGCCGTCCAGCCCCAAGGTGCATCCGGCACGCTCAGCGCGGGGAATATCATGCGCAACATGGCGCTGGCGGCAACCGGTTCGGTGTCTTACCTGTCGACCCTGTATGCCAACCAGTCGGTCACGGCCGAGGCCAAGGCCCTGAAAGAGGCGGGCATGGGCGGCGCAACGCCAATGGTAGCTCGCACTGAAACCGCCCTGAGCAACATCCGCCATCCGGACAGAGCTTCACTGCCGCATACGTTCCAGCCGGATACCCTGGGTGGCGTCCCCAGGGCCGTGGAAAACGCCTATCACATGGCCCGGGGCGCGCTGCAATTACCGACCCAGGTGGTGGTCGATACGGTGCGTGTCGTGGAAGACGGCGTAGCAAGCGGGGTGTCCTCGTTGCGCGATGCACATAAACCAGCGGAAACATCATCGCCAACAGCTGATGACGCCGCTGCTGTCGAACTGACGGCGATGGAGGAGGGCCGCCGACGCTGA
Protein sequence:
MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAARLPVAPRHLPTLEKFRAEQPTVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPERYALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARSLADQLEHFQLMHDATAEAFGPGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPVLLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGIGPIVAAAVPQFMVSMLHLGYIRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVTNLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFELKNDNGALVRKTPEEAAEDKAFVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSGIAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYSKAVSGVQSAALNGALPSVAVQPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTAEAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQPDTLGGVPRAVENAYHMARGALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
75225.2 718 6.4 -0.164 35.25
Plant infestation information
Experimental plant:
Susceptible plant: Arabidopsis thaliana Disease name: Brown spot
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.