Effector profile
PlantPEAD ID: PlantPEAD00088 Uniprot ID: Q4ZMD6 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. syringae strain B728a Other name:
Gene name: HopAB1 NCBI Gene ID: CP000075
Entry name: HPAB1_PSEU2 Protein name: Effector protein hopAB1
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGTCGGGTATCAACGGAGCAGGGCCATCAAACTTTTTTTGGCGTTGGCGCGCAGACGACGAGCCAGTAACGGAGCGCGAACGTGACTCCAGTAGCGGTGCGAACTTGACGAACAGTCCGCAGTTGCGGCCCGAATCCCCGACAGTATCCGGGAGGAGGCTGCTACGATCCAACGCGTTGTCGCGACAAACCAGAGAATGGCAGGAGACGACGTCTGCCAGTGCCGAGCGTGCCACTCCGCCTGTAGAGCCCAGGCAGCCGCCGGAGGCACAACCGGCAGAGCGCATCGTTGCAGAGCGCATCGTTCAGGAGTTGGTCAGGGCGGGCGCTAATCTTAATAATGTTCGCACCATGCTCAGAAATGTAATGGATAACAACGCGGTAGCTTTTTCTCGAGTCGAATGGAATATCTTGCTTCAGCATTTTCCTGACATGCATACGAATGGAATCAGCAGTGATTCGGTGCTCGCTAACGAGCTCCGTCAAACGCTTCGTCAGGTGGTTCACCAACAGAGAACTCAGAGAGCGTTAGCACCGATACTTTCGCCAGCCCCTTCCCGCCCCGTAGCTTCATCATCGAGAAGCAGTCAGCGTACGTTACTTGGGCGGTTCACTGGATGGATGGCACCGCGTCAAACATCGTCTTCGAGCCAGGCGACTTCTAGTACATCGGTCGACAGGCATCCTCAAGACCTCAACCAGCTGGAGTCACTACGCCTCGCCGATGCTGAGAGGCGTAATCGTAGTGCCAACCAGACTGACACTGACGAAGCCCTGCGCAGATTGACTCAAGCGGGAGTGGATATGGAGCGCCTGAGCACCTCCCTTGGCCGCTATATACATTCGTTTCAACCGGCACCCCCAGATTTGAGGCGCTTGTTAGAAAGTGTGGGCATTGACCCCGATATACCAGAGGAGTTGACCTTGGTGAATAACCCCGTATTGAACCTCAATGTTGCGCTGAATCGCATGCTGGCGTCGCGTCAGGCCACTACCGAGTCGAGCTCGGTCTTCCCAAGCCGAGCAGGTGACACGCGTGTCAGGACGTTGCCGGTAATGCCGGAGCGGGAGGACAACGAAAATAACGTTGCTTACGGAGTGCGTTTGCTTAGGCTGAACCCTGAAGCGGAGGTAGAAAGGGTCGTTGAAGCCTTTATAACCGACCCGTCGTCTCGGCCGGAAGTTGTGGCCGACATCCACGCAGTACTACGCTCTATCACTTCACAATTCAGACAACTGCGTACGATTTCGAAGGCCGATGCTGAGTCTCAGGACTTCAGGGATGCGGCAGATTACCCGGACGACCCGACGTCTTGCCTTTTTGGTGAAGATTTGTCACTGAGTAATCCGCATCAGCAGGTGATCGGCCTGGCGGGTGAATCGACAGACATATTGCAGCCTTATAGCCAAGAGGGAAATAAAGCCCTGAGGTTCATGGATATGAAGAAACTTGCTGAACACCTAGCGAGCAAACCTGTGCATCCCATGAACAGAGACAGGCTTGACGACAAAAATATCGCTGGTTATGCCTTTAGAGTCGTTCCTGACTGA
Protein sequence:
MSGINGAGPSNFFWRWRADDEPVTERERDSSSGANLTNSPQLRPESPTVSGRRLLRSNALSRQTREWQETTSASAERATPPVEPRQPPEAQPAERIVAERIVQELVRAGANLNNVRTMLRNVMDNNAVAFSRVEWNILLQHFPDMHTNGISSDSVLANELRQTLRQVVHQQRTQRALAPILSPAPSRPVASSSRSSQRTLLGRFTGWMAPRQTSSSSQATSSTSVDRHPQDLNQLESLRLADAERRNRSANQTDTDEALRRLTQAGVDMERLSTSLGRYIHSFQPAPPDLRRLLESVGIDPDIPEELTLVNNPVLNLNVALNRMLASRQATTESSSVFPSRAGDTRVRTLPVMPEREDNENNVAYGVRLLRLNPEAEVERVVEAFITDPSSRPEVVADIHAVLRSITSQFRQLRTISKADAESQDFRDAADYPDDPTSCLFGEDLSLSNPHQQVIGLAGESTDILQPYSQEGNKALRFMDMKKLAEHLASKPVHPMNRDRLDDKNIAGYAFRVVPD
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57607.2 516 6.08 -0.649 61.59
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Arabidopsis thaliana Disease name: Brown spot
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9FG29
Protein EMSY-LIKE 2
EML2
Arabidopsis thaliana (related: thale cress)
MEAQIHILEQEAYSAVLRAFQAQADEFSWDKATVMTNLRKELRISDDENRQLLNNVHNDDLIKRIRDSRPRGGNQVVRHQSLDVHPSPTFSASRKKQKTFQSYPSIGSTRSKSFNNRVVSANEPAEALIGRKVWTKWPEDNSFYEAVVTQYNANEGRHALVYDINTVNETWEWVDLNEIPTKDIRWDGEEDGVTLNVGHGGGTTRGNRRTLSHGGRGRGPRTQPRREHLATENGGGRKFFGEIELFNTDSLVKEVERVFDSNLPDPHELDKAKKLLKEHEQALIAAIARLTDASDYESDGEEPYSHELPMLLG
Q9SVY6
Non-functional pseudokinase ZRK2
ZRK2
Arabidopsis thaliana (related: thale cress)
MKSMVKKLKQSLRSGSLEKRKEKEKDIQEEKWFLDNGSIFLKELIADCNGKSIPIRNFSSDQILKATSNFGSSCFVTAEGFYVWYKGIIEDRSYMIKRFSEYKVTQYRVAEVYNEIVLSARMSNHNNFLKLIGFCLEFSLPVLVFEYAEHGVLNHRGGVIVNGEEVILPLSLRLKIGKEIANAVTYLHMAFPKILIHRHIKPRNVFLDENWTPKLSDFSISINLPEGKSRIEVECVQGTIGYLDPVYYTTKMVTEYTDVYSFGVFLMVILTGKPALASTSSDGDYKHIASYVKGFHENGQLDGVIDPKVMEDITSAQKVHVEACVVLALRCCELRDENRPKMIQIAKELKQIETLFRRS
Q9FN94
Receptor-like protein kinase At5g59670
Arabidopsis thaliana (related: thale cress)
MESSFGLLLALLTLTIIHIVQAQDPQGFISLDCGLPANETSPYTETQTGLLFSSDATFIQSGKTGRVQANQESKFLKPYRTLRYFPEGVRNCYNLSVFKERKYLIAASFLYGNYDGHNIAPVFDLYLGPNLWAKIDLQDVNGTGEEILHIPTSNSLQICLVQTGETTPLISSLELRPMRTGSYTTVSGSLKTYRRLYFKKSGSRLRYSKDVYDRSWFPRFMDEWTQISTALGVINTNIYQPPEDALKNAATPTDASAPLTFKWNSEKLDVQYYFYAHYAEIQDLQANDTREFNILLNGQNLSVTGPEVPDKLSIKTFQSSSPISCNGWACNFQLIRTKRSTLPPLLNALEVYTVIQFPRSETDESDVVAMKNISASYGLSRINWQGDPCFPQQLRWDALDCTNRNISQPPRITSLNLSSSRLNGTIAAAIQSITQLETLDLSYNNLTGEVPEFLGKMKSLSVINLSGNNLNGSIPQALRKKRLKLYLEGNPRLIKPPKKEFPVAIVTLVVFVTVIVVLFLVFRKKMSTIVKGLRLPPRTSMVDVTFSNKKSKRFTYSEVVQVTKNFQRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGDSHITQWVGFQMNRGDILEIMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMSQVIHELKECIACENTGISKNRSLEYQEMNVSLDTTAVPMAR
Q9LII8
Protein KINESIN LIGHT CHAIN-RELATED 2
KLCR2
Arabidopsis thaliana (related: thale cress)
MDVGESNERVKDDSALQASPRSPLSSIDLAIDGAMNASIEQLYHNVCEMESSDDQSPSRASFISYGAESRIDLELRHLVGDVGEEGESKKEIILEKKEESNGEGSLSQKKPLSNGKKVAKTSPNNPKMPGSRISSRKSPDLGKVSVDEESPELGVVLLKQARELVSSGENLNKALDLALRAVKVFEKCGEGEKQLGLNLVMSLHILAAIYAGLGRYNDAVPVLERSIEIPMIEDGEDHALAKFAGCMQLGDMYGLMGQVENSIMLYTAGLEIQRQVLGESDARVGETCRYLAEAHVQAMQFEEASRLCQMALDIHKENGAAATASIEEAADRKLMGLICDAKGDYEVALEHYVLASMAMSSQNHREDVAAVDCSIGDAYMSLARFDEAIFAYQKALAVFKQGKGETHSSVALVYVRLADLYNKIGKTRDSKSYCENALKIYLKPTPGTPMEEVATGFIEISAIYQSMNELDQALKLLRRALKIYANAPGQQNTIAGIEAQMGVVTYMMGNYSESYDIFKSAISKFRNSGEKKTALFGIALNQMGLACVQRYAINEAADLFEEAKTILEKECGPYHPDTLAVYSNLAGTYDAMGRLDDAIEILEYVVGTREEKLGTANPEVEDEKQRLAALLKEAGRGRSKRNRALLTLLDNNPEIANGQRPVY