Effector profile
| PlantPEAD ID: PlantPEAD00092 | Uniprot ID: B9ZUL0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 5022 | Pathogen type: Fungi |
| Species: Leptosphaeria maculans | Strain: strain v23.1.3 | Other name: Phoma lingam |
| Gene name: AvrLm4-7 | NCBI Gene ID: AM998638 | |
| Entry name: B9ZUL0_LEPMC | Protein name: AvrLm4-7 protein | |
| DOI: 10.1111/j.1365-2958.2008.06547.x | ||
Gene/Protein information
Gene sequence:
AAGTTACAACGACAAGCTTATTTAACAATCAAGTTGTTTACTCCTATTTTTGTTATATCTAACTTACTTATTAATATCTTTACTTCCACCAAGTATAAACCCTTTGACAGTTAACAACATGCCACTATCCCTCGAGATAATCTTAACGCTACTCGCTCTCTCTATCCCTACAATTACAGCTTGTAGAGAGGCCTCAATATCTGGAGAAATTCGCTATCCTCAAGGCACTTGTCCCACAAAGACTGAAGCTTTGAATGATTGTAACAAAGTAACGAAGGGCTTAATTGACTTTAGTCAATCGCATCAACGTGCCTGGGGTATAGATATGACGGCCAAAGTCCAATGTGCGCCCTGCATAACTACCGACCCTTGGGATGTAGTTCTTTGCACTTGCAAGATCACGGCGCATAGATATCGAGAATTCGTTCCCAAAATTCCCTATAGCAGCTTTAGCTCAGCACCTGGAGTTATATTTGGCCAGGAGACTGGTTTAGACCATGACCCTGAATGGGTTGTTAACATGAAAGCAAGGACTCGTGGTTGCGACTAAAGATACGGAG
Protein sequence:
MPLSLEIILTLLALSIPTITACREASISGEIRYPQGTCPTKTEALNDCNKVTKGLIDFSQSHQRAWGIDMTAKVQCAPCITTDPWDVVLCTCKITAHRYREFVPKIPYSSFSSAPGVIFGQETGLDHDPEWVVNMKARTRGCD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15790.2 | 143 | 6.27 | -0.084 | 29.97 |
Plant infestation information
| Experimental plant: Brassica napus (related: rape) | |
| Susceptible plant: Brassica napus | Disease name: Phoma stem canker |
| Host classification: Eudicots | NCBI Species: 3708 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR040621
Pfam: PF18661
SMART:
KEGG:
PRINTS: