Effector profile
PlantPEAD ID: PlantPEAD00093 Uniprot ID: Q5G7K8 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 272952 Pathogen type: Oomycota
Species: Hyaloperonospora arabidopsidis Strain: Emco5 Other name: Peronospora arabidopsidis
Gene name: ATR13(Emco5) NCBI Gene ID: AY785305
Entry name: ATR13_HYAAB Protein name: Avirulence protein ATR13
DOI: 10.1105/tpc.107.054262
Gene/Protein information
Gene sequence:
ATGCGCCTTGTTCACGCGGTACTGCTACCTGGCATTATTGTCTTCGTATCCAACGGGAATCTGCTCCACGCCCATGCGCTCCATGAGGACGAGACGGGTGTCACTGCTGGTCGCCAGCTCCGAGCAGCCGCCAGCGAAGTATTTGGACTCTCACGAGCTAGTTTCGGGCTTGGTAAGGCTCAAGATCCGCTCGACAAGTTCTTTTCGAAGATAATCTTCTCGGGGAAGCCCATCGAAACCAGTTATTCGGCTAAAGGCATCCACGAGAAGATTATAGAGGCACACGATCTTCATGTCTCCAAATCTAAGAACGCCCCCATCCAGTATGCCAGTGTAATGGAATACCTGAAAAAAACCTACCCCGGTCCGGACATTGAACGTATTGTCTCGACGCTCGAGCGTCACGACGAAGTAGGAGCTAAAGATTTGGGAGCGAAACTTCGGGATGCTCTTGACAGACAGTAG
Protein sequence:
MRLVHAVLLPGIIVFVSNGNLLHAHALHEDETGVTAGRQLRAAASEVFGLSRASFGLGKAQDPLDKFFSKIIFSGKPIETSYSAKGIHEKIIEAHDLHVSKSKNAPIQYASVMEYLKKTYPGPDIERIVSTLERHDEVGAKDLGAKLRDALDRQ
Protein structure:
PDB(NMR)(2LAI)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
16884.3 154 8.02 -0.197 20.94
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Arabidopsis thaliana Disease name: Downy mildew of Arabidopsis
Host classification: Eudicots NCBI Species: 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9M667
Disease resistance protein RPP13
RPP13
Arabidopsis thaliana (related: thale cress)
MVDAITEFVVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEAREREDEVSKEWSKLVLDFAYDVEDVLDTYHLKLEERSQRRGLRRLTNKIGRKMDAYSIVDDIRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSVDQEEVVVGLEDDAKILLEKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTGDILMRIIRSLGMTSGEELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDIWEREAWDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFEQRAFRNIQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKTPSEWNDVCNSLWRRLKDDSIHVAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMEDVARYYIEELIDRSLLEAVRRERGKVMSCRIHDLLRDVAIKKSKELNFVNVYNDHVAQHSSTTCRREVVHHQFKRYSSEKRKNKRMRSFLYFGEFDHLVGLDFETLKLLRVLDFGSLWLPFKINGDLIHLRYLGIDGNSINDFDIAAIISKLRFLQTLFVSDNYFIEETIDLRKLTSLRHVIGNFFGGLLIGDVANLQTLTSISFDSWNKLKPELLINLRDLGISEMSRSKERRVHVSWASLTKLESLRVLKLATPTEVHLSLESEEAVRSMDVISRSLESVTLVGITFEEDPMPFLQKMPRLEDLILLSCNYSGKMSVSEQGFGRLRKLDLLMRSLDELQIEEEAMPNLIELEISVSKRETKLIIPNRLRAFGQIYC