Effector profile
| PlantPEAD ID: PlantPEAD00095 | Uniprot ID: Q4VKJ1 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 123356 | Pathogen type: Oomycota |
| Species: Hyaloperonospora parasitica | Strain: strain Cala2 | Other name: Peronospora parasitica |
| Gene name: ATR1(Cala2) | NCBI Gene ID: AY842883 | |
| Entry name: Q4VKJ1_9STRA | Protein name: Avirulence protein | |
| DOI: 10.1105/tpc.107.054262 | ||
Gene/Protein information
Gene sequence:
ATGCGCGTCTGCTACTTCGTTCTCCTGCCTTCTGTTGCTCTGGCCGTCATAGCCACCGAGTCGTCGGAAACGTCCCGCACGATCGTCCACGTGTTCCCCCTCCGTGACGTCGCCGACCATCGCAACGACGCTCTAATCAATCGGGCGTTGAGAGCGCAGGCAGCTCTCGATGACGATGAAGAGAGATGGCCGTTCGGGCCTTCGGCCGTCAAAGCGTTGATTAGAACCATCGACAGCCATAGAGCCGGCTTGAATGATGAGGCTAAGATGAAGGAGGTCGTACAAACCTGGAACAAACTAATCGAACGGGATAATTTGATTGACGAGATAGGAAAACATTATAGTAAAGCGCCGGGGCCAGTCTATGATTCCTATGATGAAGCTCTCGCCACTATGCTAGTAACAACCTATTCGTATCGCGGAGTAGCTCGGGCAATTCTACATCCAAGGCCTTCGGACCCAATTTCGAATAAGGCAGGGCGAGCGCACCGATTGGAGGAAGCAGTGGCATCACTATGGAAAGAGCGAGGATACACCTCACACAATGTCGTTTCAAACATTGCTACCGACGACGATGTTGACTTTTTCGCATCCACGGCCTTCACTTTCCTAGTAAAGTGTGTCGAATCTGAGGACGACGCGAACAACGCCATATTCGAGTATTTTGGTAGTAATCCCAGCAGATACTTTTCCGCTGTGCTGCACGCGATGGAGAAGCCTGGTGCTGATATTCGAAAGCTTGAAAACAGCAAAAAATGGATGTTTCGATTATATGCGCAAGCGCCGGAGCCGTTCTCTCCACCAGATTTTGAATGGGCCCTGGCTCGTTTCCAGGATGAAGACCATGCGTTTGTTGGTGCACAGAACGACTACAAGAAGCTCAGCCCCTCTCAAATCGAGAAACTCGTGGAAGAGTATTCGGGAATATATTCTGTAACATCTCGTAACTTCGTAGGGCGCGCGAGCGAGTAG
Protein sequence:
MRVCYFVLLPSVALAVIATESSETSRTIVHVFPLRDVADHRNDALINRALRAQAALDDDEERWPFGPSAVKALIRTIDSHRAGLNDEAKMKEVVQTWNKLIERDNLIDEIGKHYSKAPGPVYDSYDEALATMLVTTYSYRGVARAILHPRPSDPISNKAGRAHRLEEAVASLWKERGYTSHNVVSNIATDDDVDFFASTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPGADIRKLENSKKWMFRLYAQAPEPFSPPDFEWALARFQDEDHAFVGAQNDYKKLSPSQIEKLVEEYSGIYSVTSRNFVGRASE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36448.9 | 323 | 5.45 | -0.4 | 42.18 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
F4J339
|
Probable disease resistance protein RPP1
|
RPP1
|
Nicotiana benthamiana (no common name found)
|
MGSVMSLGCSKRKATNQDVDSESRKRRKICSTNDAENCRFIQDESSWKHPWSLCANRVISVAAVALTNFRFQQDNQESNSSSLSLPSPATSVSRNWKHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIVLLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGKPKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALAKETRWFGPGSRIIITTEDLGVLKAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDVLCDEDKYLFLYIACLFNGESTTKVKELLGKFLDVKQGLHLLAQKSLISFDGERIHMHTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEEELNISEKVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPSTFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQISYFESLMEFPHAFDIITKLHLSKDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCCFNNPEIRLYFPKCFKLNQEARDLIMHTCIDAMFPGTQVPACFIHRATSGDSLKIKLKESPLPTTLRFKACIMLVKVNEELMSYDQTPMIVDIVIRDEHNDLKEKIYPSIYPSIYPLLTEHIYTFELDVEEVTSTELVFEFPQLNKRNWKIGECGILQRETRSLRRSSSPDLSPESSRVSSYDHCLRGD
|
External Links
Interpro: IPR048935
Pfam: PF21421
SMART:
KEGG:
PRINTS: