Effector profile
| PlantPEAD ID: PlantPEAD00096 | Uniprot ID: M4C367 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: ATR13(Emco2) | NCBI Gene ID: AY785302 | |
| Entry name: ATR13_HYAAE | Protein name: Virulence protein ATR13 | |
| DOI: 10.1105/tpc.107.054262 | ||
Gene/Protein information
Gene sequence:
TTGTATCTGGGTACTTGCGGAACTGCATACTATAGCACGCGCACGTTCGGTTCACCTCCCACTAATTATCCAGCACTAGACCACGGCAAGCACGTGTCCAATGCAGAGATCGGACGGCACGCTGGACGAACAACGCACCGTGTTTTTCAAAGGCCGAACTTCATGTCATTTCCGCATTCGCCTTTCAAGAATCACCTCCCGAGTCCCCCATCTGAACAATGCGCCTTGTTCACGCGGTACTGCTACCTGGCATTATTGTCTTCGTATCCAACGGGAATCTGCTCCACGCCCATGCGCTCCATGAGGACGAGACGGGTGTCACTGCTGGTCGCCAGCTCCGAGCAGCCGCCAGCGAAGTATTTGGACTCTCACGAGCTAGTTTCGGGCTTGGTAAGGCTCAAGATCCGCTCGACAAGTTCTTTAGGAAGATAATAAACTCGCGGAAGCCCATCGAAACCAGTTATTCGGCTAAAGGCATCCACGAGAAGATTATAAAGGCATACGATCGTCATGTCTTCGAATCTAAGAAGGCACACGATCGTCATGTCTCCAAATCTAAGAAGGCACACGGTCGTCATGTCTCCAAATCTAAGATGGCACACGATCGTCATGTCTCCAAATCTGAGAAGGCCCCCATCCAGTATGCCAGTGTAGCGGATTACCTGAAAAAAATCTACCCCGGTACGGACATTGAACGTATTGTCTCGACGCTCAAGCGTCACGACGAAGTAGGAGCTAAAGATTTGGGAGCGAAACTTCAGACTGCCGTTGCCAGTCAGTAG
Protein sequence:
MRLVHAVLLPGIIVFVSNGNLLHAHALHEDETGVTAGRQLRAAASEVFGLSRASFGLGKAQDPLDKFFRKIINSRKPIETSYSAKGIHEKIIKAYDRHVFESKKAHDRHVSKSKKAHGRHVSKSKMAHDRHVSKSEKAPIQYASVADYLKKIYPGTDIERIVSTLKRHDEVGAKDLGAKLQTAVASQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20703.8 | 187 | 9.99 | -0.453 | 26.32 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q9M667
|
Disease resistance protein RPP13
|
RPP13
|
Arabidopsis thaliana (related: thale cress)
|
MVDAITEFVVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKDVEAREREDEVSKEWSKLVLDFAYDVEDVLDTYHLKLEERSQRRGLRRLTNKIGRKMDAYSIVDDIRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSVDQEEVVVGLEDDAKILLEKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTGDILMRIIRSLGMTSGEELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDIWEREAWDSLKRALPCNHEGSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFEQRAFRNIQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKTPSEWNDVCNSLWRRLKDDSIHVAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMEDVARYYIEELIDRSLLEAVRRERGKVMSCRIHDLLRDVAIKKSKELNFVNVYNDHVAQHSSTTCRREVVHHQFKRYSSEKRKNKRMRSFLYFGEFDHLVGLDFETLKLLRVLDFGSLWLPFKINGDLIHLRYLGIDGNSINDFDIAAIISKLRFLQTLFVSDNYFIEETIDLRKLTSLRHVIGNFFGGLLIGDVANLQTLTSISFDSWNKLKPELLINLRDLGISEMSRSKERRVHVSWASLTKLESLRVLKLATPTEVHLSLESEEAVRSMDVISRSLESVTLVGITFEEDPMPFLQKMPRLEDLILLSCNYSGKMSVSEQGFGRLRKLDLLMRSLDELQIEEEAMPNLIELEISVSKRETKLIIPNRLRAFGQIYC
|
External Links
Interpro: IPR031791,IPR038525
Pfam: PF16829
SMART:
KEGG:
PRINTS: