Effector profile
| PlantPEAD ID: PlantPEAD00098 | Uniprot ID: I1VGT7 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 914237 | Pathogen type: Fungi |
| Species: Rhynchosporium commune | Strain: UK7 | Other name: |
| Gene name: NIP2 | NCBI Gene ID: JQ349028 | |
| Entry name: I1VGT7_9HELO | Protein name: NIP2 avirulence protein | |
| DOI: 10.1094/MPMI-03-12-0065-R | ||
Gene/Protein information
Gene sequence:
ATCTTTCAACCCCAGTTTTGCCAGGGACAATCAGCTTTCCCTGTTGCAGTAGTGACTGCTCCGTGCTGTAGCTTGTGTGCACCAAAATCCTCTTTCAATTATAACCTGATCAAGAGAAGTATCGAGTAGCCGGGAATCCCTACATAATCAGGGGGTAAAAGATTACCGATGCTCCTCCGTATGACCGAGACAAGGACCGAAGTTGAATGAACTAAGATCCTTTGCAAGGTTCTACTGTACTAGTATATTGTTTCCGAACTTCAAAACCTTCTTCTTTACAGTTTAATTAATCCAGTCACTAGTTCAGAGACTGCCTACTGTCTCTTGACTACAGTATTTTTTGTACTAACACAGCTCCATCCGTTCATACTTGGTAGTAAGGGTAAATAAACCTCTACCCTCTTGCGGGGCTCTAGTAGGTTCTCCCCTATAATTAGACTGAAATTAGTTAAATGATTAGATGCTAGTCCATGCTGAGTCTCGTGCTGATGAAGGCAAGGTAAGGGTTTATTTATCCTTACCGCGAGTAGAATGCGAGTAGCATAAGTATCGACGTGAATCCCACCACAACCACGCCGCATTAATCACTCATTTATAGCAATTTCAGTCATTCACACCATGAAGTATCTCTCAATCCTCACCGCCTGCGTCGCCGTCACCCATGCCTACTATGTTGTCGTCTGTGTTCCCCGTGACGGTGCTGAGATTGGAGATGTAGAATGGGCAATTCAAAATAGGCGTCATGATTTAGCCCTTGGTGGAAAAGGATTCTGGAGAGGGCATTCAACGTCTTGTCACAGGAACGCAAACGCGGTCGTGGACGTCGTGGCCCTCTGTCGGAGCGATCCATACATTGGCGCACACCCGACGGTTCTTAAGTATGGGGCATCAGTTCTATGCCAGGCTTCGGGAGCCCCTGATTGGCCTACGTGTACAGTTAATTGTTGATAAGTAAGCACCCTCTACCCTAACAACAGATCTGTACTCAAGCTCACATATAGAGGGTTTGGGACACTCGCCGCTGTAGGCATTCCTGATTGTCAACGCTGGGTTCTAGCTTCAACCGACAAGCGGATGGGGAAGATTATTGCGAATGTACGGGAAGGATTCCGCGAACGTACGAGAAGGATTATTTGGTTCTCCCGAGGATAAACGGTGAATGTACTATTACCTTGTTGTGAGTTATGTTTGGTGGCATTTACTTTCCAGGAGGCGGTGGTGTCGTGACGGCAGTTCAAACTAGAAAAAAAGTTCAACATAGAGCTTACATATGTCTCTTGCGCGGTTCTCGGTTGCTCTAGCTGCTACATCGACACTGTCACGGCCCAGTAGCGGCGCTATACATATAAGGGGTTCTTCCACCCTACTCGATCGTTTCTTTATCTTTCTTTTCCCGTTGTACAGCCCAGTAAGCTCGCCCTTGGCTCCTTACTTTTTTCATCATTGCGTTTATACCGGGTTGAGTTTGTGTATTGACTAAGGTATCGAGTCGATAACCTAACTGGAAACAAAAGGAGGGCAGGACACAACGCGAAATCTGTCTTTTGTCAAATGAACGTAGATTGTAGTACGCTCATGCGTAATATCCTGGTAGTAACCAGCCCCTGAGTTCATATACGGAGTTCCAGTGGCTCTCCTTTCTAGACTCATCACACTGCTTAGCACCTTTGAAATCGCCATGTTTTTAGTGCCTTAGTTGTCCGTACTAAGCCTTAAATGCGCTAAGGTTACAATCTTTTGCCTTCTTCCTCCAGGGGATGCGAGGAT
Protein sequence:
MKYLSILTACVAVTHAYYVVVCVPRDGAEIGDVEWAIQNRRHDLALGGKGFWRGHSTSCHRNANAVVDVVALCRSDPYIGAHPTVLKYGASVLCQASGAPDWPTCTVNC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 11746.5 | 109 | 7.62 | 0.142 | 27.74 |
Plant infestation information
| Experimental plant: Hordeum vulgare (related: barley) | |
| Susceptible plant: Hordeum vulgare | Disease name: Barley leaf scald |
| Host classification: Monocots | NCBI Species: 4513 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: