Effector profile
| PlantPEAD ID: PlantPEAD00109 | Uniprot ID: G4ZRQ8 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 67593 | Pathogen type: Oomycota |
| Species: Phytophthora sojae | Strain: strain P6497 | Other name: Phytophthora megasperma f. sp. glycines |
| Gene name: Avr1b | NCBI Gene ID: XM_009533001 | |
| Entry name: G4ZRQ8_PHYSP | Protein name: RxLR effector protein | |
| DOI: 10.1105/tpc.107.057067; 10.3389/fpls.2021.725571 | ||
Gene/Protein information
Gene sequence:
ATGCGTCTATCTTTTGTGCTTTCTCTTGTCGTGGCCATTGGCTACGTCGTGACCTGCAACGCAACTGAGTACTCCGACGAAACCAATATCGCCATGGTGGAATCTCCAGATCTCGTCCGTCGCTCGCTCAGGAACGGCGACATTGCCGGTGGAAGATTTCTTCGAGCTCATGAAGAGGACGATGCGGGGGAGCGGACCTTCAGCGTGACTGACCTGTGGAACAAGGTGGCGGCCAAAAAGTTGGCCAAGGCGATGCTGGCGGACCCTTCAAAGGAGCAGAAAGCGTACGAGAAGTGGGCAAAGAAGGGGTACAGCCTGGATAAGATCAAGAACTGGTTGGCAATCGCGGACCCCAAGCAGAAGGGGAAGTACGACCGTATCTACAACGGATACACCTTTCACCTGTATCAGAGCTGA
Protein sequence:
MRLSFVLSLVVAIGYVVTCNATEYSDETNIAMVESPDLVRRSLRNGDIAGGRFLRAHEEDDAGERTFSVTDLWNKVAAKKLAKAMLADPSKEQKAYEKWAKKGYSLDKIKNWLAIADPKQKGKYDRIYNGYTFHLYQS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15671.9 | 138 | 9.1 | -0.487 | 32.88 |
Plant infestation information
| Experimental plant: Glycine max (related: soybean) | |
| Susceptible plant: Glycine max | Disease name: Root and stem rot of soybean |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
A0A445FEC0
|
U-box domain-containing protein
|
Glycine soja(related: wild soybean)
|
MDEIEIPAHFLCPISLQLMRDPVTVCIGITYDRENIERWLFSCKNNTCPVTKQCLLDHGLTPNHTLRRLIQSWCTLNASLGVERIPTPKSPIDKTHCETPHRSKKVPREASQVPHKASIRCL
|
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG: psoj:PHYSODRAFT_286704
PRINTS: