Effector profile
| PlantPEAD ID: PlantPEAD00120 | Uniprot ID: Q68A49 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: Hpx17 | NCBI Gene ID: AB178011 | |
| Entry name: RIP19_RALSL | Protein name: TAL effector protein Rip19 | |
| DOI: 10.1111/nph.12324 | ||
Gene/Protein information
Gene sequence:
ATGAGAATAGGCAAATCAAGCGGTTGGTTGAACGAGTCCGTGTCTCTTGAATATGAACACGTGTCCCCACCGACACGGCCTCGAGACACCCGTCGCCGGCCTCGCGCCGCTAGCGACGGCGGGCTCGCGCATCTGCATCGCCGGCTCGCGGTCGGCTACGCGGAGGACACGCCGAGAACCGGGGCTCGGTCTCCGGCGCCGCGCCGCCCGCTCCCTGTGGCACCTGCATCCGCACCGCCTGCACCGTCCCTCGTTCCGGAACCCCCTATGCCGGTCAGCCTTCCTGTCGTATCGAGCCCGCGCTTCTCTGCCGGCAGCTCGGCAGCCATCACCGATCCTTTTTCGAGCCTTCCGCCCACGCCCGTGCTGTATGCGATGGCTCGCGAACTGAAGGCGCTGTCCGACGCTACCTGGCAGCCAGCCGTACCGTTGCCCGCCGAGCCGCCTACTGATGCGCGGCGCGGCAACACGGTATTTGACGAAGCGTCTGCATCATCGCCGGTGATCGCCTCTGCCTGCCCTCAAGCGTTTGCCAGCCCACCGCGAGCACCGCGCTCGGCGCGAGCCCGCAGGGCTCGGACAGGCGGTGATGCTTGGCCGGCCCCGACTTTTCTTAGCCGCCCCTCGTCATCCCGCATCGGCCGTGACGTGTTCGGGAAACTGGTCGCACTCGGCTATTCCCGTGAGCAGATCCGGAAGCTCAAGCAGGAGAGCCTGAGCGAAATTGCGAAGTATCACACCACCTTGACAGGACAAGGGTTCACGCACGCCGACATCTGCCGGATCAGCCGCAGACGGCAGTCGCTCCGGGTGGTCGCCAGGAACTACCCGGAGTTGGCTGCGGCGCTCCCTGAGCTGACCAGGGCCCACATCGTGGACATCGCTCGGCAGCGATCGGGCGACTTGGCGCTGCAAGCGCTGCTACCCGTGGCGACCGCACTGACAGCGGCCCCCCTGAGATTGAGCGCCTCGCAAATCGCGACCGTTGCGCAGTACGGCGAGCGGCCGGCCATCCAGGCCCTTTATCGGCTGCGCCGGAAGCTCACGCGAGCACCGCTGCATCTCACACCGCAGCAGGTGGTGGCCATCGCCAGCCACGATGGCGGTAAACCGGCGCTGGAAGCGGTCTGGGCGAAATTGCCGGTATTGCGCGGGGTGCCCTATGCGCTGAGCACCGCGCAAGTGGTGGCCATTGCCTGCATCAGTGGCCAGCAGGCGCTGGAGGCAATCGAGGCGCACATGCCTACATTGCGCCAAGCCCCCCACAGCCTGAGTCCCGAGCGGGTGGCGGCGATCGCGTGCATCGGCGGCCGATCAGCCGTGGAGGCCGTCAGGCAGGGGTTGCCGGTGAAGGCGATCCGGCGGATACGGCGCGAGAAAGCCCCTGTAGCCGGGCCGCCACCAGCCTCTCTTGGCCCAACCCCGCAGGAACTCGTGGCGGTCCTGCATTTCTTCCGTGCACATCAGCAGCCCAGACAGGCCTTTGTCGACGCACTGGCAGCGTTCCAGACCACCAGACCGGCACTGTTGAGGTTGCTCAGCAGTGTTGGGGTCACAGAAATCGAGGCGCTCGGCGGCACGATCCCCGACGCCACCGAGCGCTGGCAGCGCCTGCTTGGCCGGCTGGGCTTCAGGCCGGCAACCGGCGCTGCCGCGCCTTCGCCTGATTCCCTGCAAGGGTTCGCCCAGTCACTTGAGCGCACGCTCGGGTCTCCCGGTATGGCAGGGCAATCGGCTTGCTCACCACATCGCAAGCGGCCTGCCGAGACGGCCATCGCACCGCGGTCGATACGACGCAGACCCAACAATGCGGGCCAACCCTCCGAGCCATGGCCCGATCAACTGGCATGGCTCCAACGCAGGAAACGTACCGCTCGTTCGCACATACGGGCCGATTCGGCGGCAAGCGTGCCGGCAAATCTCCACTTGGGCACGCGAGCCCAGTTCACGCCAGATCGTCTTCGGGCCGAACCGGGACCCATCATGCAGGCTCACACATCGCCGGCATCGGTCAGCTTCGGTTCTCACGTTGCTTTCGAGCCTGGCCTGCCGGACCCCGGTACGCCCACCTCAGCAGATCTTGCATCGTTCGAGGCTGAGCCGTTCGGCGTCGGGCCGCTTGATTTCCACCTCGACTGGCTTCTGCAAATATTGGAAGCGTGA
Protein sequence:
MRIGKSSGWLNESVSLEYEHVSPPTRPRDTRRRPRAASDGGLAHLHRRLAVGYAEDTPRTGARSPAPRRPLPVAPASAPPAPSLVPEPPMPVSLPVVSSPRFSAGSSAAITDPFSSLPPTPVLYAMARELKALSDATWQPAVPLPAEPPTDARRGNTVFDEASASSPVIASACPQAFASPPRAPRSARARRARTGGDAWPAPTFLSRPSSSRIGRDVFGKLVALGYSREQIRKLKQESLSEIAKYHTTLTGQGFTHADICRISRRRQSLRVVARNYPELAAALPELTRAHIVDIARQRSGDLALQALLPVATALTAAPLRLSASQIATVAQYGERPAIQALYRLRRKLTRAPLHLTPQQVVAIASHDGGKPALEAVWAKLPVLRGVPYALSTAQVVAIACISGQQALEAIEAHMPTLRQAPHSLSPERVAAIACIGGRSAVEAVRQGLPVKAIRRIRREKAPVAGPPPASLGPTPQELVAVLHFFRAHQQPRQAFVDALAAFQTTRPALLRLLSSVGVTEIEALGGTIPDATERWQRLLGRLGFRPATGAAAPSPDSLQGFAQSLERTLGSPGMAGQSACSPHRKRPAETAIAPRSIRRRPNNAGQPSEPWPDQLAWLQRRKRTARSHIRADSAASVPANLHLGTRAQFTPDRLRAEPGPIMQAHTSPASVSFGSHVAFEPGLPDPGTPTSADLASFEAEPFGVGPLDFHLDWLLQILEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 77065.1 | 720 | 11.01 | -0.257 | 72.06 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005042
Pfam: PF03377
SMART:
KEGG:
PRINTS: