Effector profile
| PlantPEAD ID: PlantPEAD00123 | Uniprot ID: A0A2U7NR52 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 552 | Pathogen type: Bacteria |
| Species: Erwinia amylovora | Strain: strain Ea-K1 | Other name: Fire blight bacteria |
| Gene name: AvrRpt2 | NCBI Gene ID: KX522576 | |
| Entry name: A0A2U7NR52_ERWAM | Protein name: AvrRpt2 | |
| DOI: 10.1016/j.jsb.2019.03.010 | ||
Gene/Protein information
Gene sequence:
GTGAAAGTCAGTCATCTCACATCCCCCGCCCCTGTCGTAATCGAGCACCAGCCTCGTCAATCAGAGAAAGTAAGCCGCGATGGCGATGTCATCAAACCCTGGTCCCAGCTACCGGCCGCAGCGCCATCTTTTGGCGGATGTTTCGGCAAAAGTAAAAAGTCCAGAGGGTACGACTCTGGAAGCAGTTCCGGCTCTCGCAGTAACGCCGGCTTTCGCTTAAACCATGTACCTTATGTGTCTCAACAGAATGAGCGAATGGGCTGCTGGTATGCCTGCACCAGAATGCTGGGCCATAGCATCAGCAGCGGCCCACGGCTGGGGCTGCCAGAACTCTATGACTCTTCAGGCCCGCAAGGACTACAACAACGTGAAGATGTGCTCAGGCTGATGCGAAATGAAAACCTTGCCGAAGTGAGTTTACCGGAATCAAGGCAGTTTTCAGCCAATGAACTCGGCAATCTCTTGTGTCGCCATGGACCCATTATGTTTGGTTGGCAAACCCCGGCCGGCAGCTGGCATATGTCTGTGCTGACCGGGATAGACAAGCCCAACGATGCGATTATTTTTCACGATCCGCAACGCGGTCCGGATCTGACCATGCCGTTGGATTCATTCAACCAGCGTCTGGCATGGCGGGTGCCACACGCCATGTTATACAGTGAAAATTAG
Protein sequence:
MKVSHLTSPAPVVIEHQPRQSEKVSRDGDVIKPWSQLPAAAPSFGGCFGKSKKSRGYDSGSSSGSRSNAGFRLNHVPYVSQQNERMGCWYACTRMLGHSISSGPRLGLPELYDSSGPQGLQQREDVLRLMRNENLAEVSLPESRQFSANELGNLLCRHGPIMFGWQTPAGSWHMSVLTGIDKPNDAIIFHDPQRGPDLTMPLDSFNQRLAWRVPHAMLYSEN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24615.8 | 222 | 8.73 | -0.562 | 60.42 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Malus domestica, Pyrus | Disease name: Fire blight |
| Host classification: Eudicots | NCBI Species: 3750, 3766 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
I7K8M0
|
FB_MR5
|
FB_MR5
|
Malus x robusta
|
MGGEAFLVAFLQVLVDKLAHREVFKYFGLVKGVDQKLKKWSATLSAIGAVLNDAEERQLTAKNNTLKLWLEDLRDLAFDVEDVLDKYATKMLKRQIQHAHSRTTSKLWNSIPDGVFNFNMNSEIQKISERLQEISEQKDQLNLKIDTGALTTRARRNISPSSSQPDGPVIGRDEDKRKIVELLSKQEHRTVNFDVVAIVGMAGVGKTTLAGQVLNDMVATQTFQPAVWACVSDDFNLERVTKQILESITSRQCTTEDYNKVQDYLHKELAGKKFLIVLDDVWKTCSYGEWMKLQSPFRDGAQGSKIIVTTRDTDVSKMMGAATLVHNLEPMESSVCLQVFEQHAFLNSNDDKPPNYELLKEKIAAKCRGLPLAARTLGGVLLRKDTYEWEDILNNKLWSLSNEHDILPVLRLTYFYLPSHLKRCFAYCSILPNDYEFEEKQMILLWMAEGFILPRPEDKKQIEDLGADYFRDLVSRSLFQKSTKCISKYVMHDLIGDLARWAAGEICFRLEDKQNDDGEQLRCFPKARHSSYIRGLSDGVKRFEVFSELKYLRTFLPLRKDSFWNYLSRQVAFDLLPKLQYLRVLSFNCYKITELPDSIGDLRYLRYLDLSYTDITSLPKSTSTLYNLQTLILEGCSKLKALPIDMSNLVNLRHLNNSNVSLLEDMPPQLGRLVNLQSLTKFVVSGGGGGDRSGIRELEFLMHLRGTLCISRLENVTDVEDAQRANLNCKERLDSLVLEWSHSSDTRETESAVLDMLQPHTKLKELTIKSYAGKEFSSWVGVPLFSNMVLVRLEECNNCLSLPPLGKLPHLKELYIRGMNAVESVGAEFYGECSLPFPLLETLEFVDMQHWKVWLPFQTDHRGSVFPCLKTLLVRKCSKLEGKLPENLDSLASLEIVKCEELLVSIANYKQLRQLNIDGCKGVVHTAAKVEFELLESLYLSNISELTSLQTGELCRNGLNMVRDLKINGCEELTSSLKNEAILLQQLISLGRLEIEDNSLLVEELGKEADELLQLQILGCKLEFLKLKKCKNLLKLPEGLNQLSSLQELRIHECSSLVSFPDVGLPPSLKDIEITECHSLIYFAKSQIPQNLRRIQIRDCRSLRSLVDNEAVGSCSSSSHNCLEYLNIERCQSLTLLSLSDQLVRALRELDIYDCEQLEFLAPDGLFCNNTNYFLENFRIRRCQNLKSLPRLSGGIRGSNLREIRITDCDRLEALPEDMHNFNSLEKLIIDYREGLTCSFPANLTSLMIWKVKSCKSLWELEWGLHRLTSLRYLWIGGEDPDMVSFPPDMVRMETLLPKSLTELSIGGFPNLKKLSSKGFQFLTSLESLELWDCPKLASIPKEGLPLSLTELCIYGCPVLKERCQPGKGRYWHKISHIPYIDIDWKMI
|
External Links
Interpro: IPR022118
Pfam: PF12385
SMART:
KEGG:
PRINTS: