Effector profile
| PlantPEAD ID: PlantPEAD00131 | Uniprot ID: Q9JP38 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: Ipx10 | NCBI Gene ID: AF232004 | |
| Entry name: Q9JP38_PSEUB | Protein name: Uncharacterized protein | |
| DOI: 10.1046/j.1365-2958.2002.02877.x | ||
Gene/Protein information
Gene sequence:
GATCATGCAAGCGGGTCAGGTAATCCATCGCCGCCTTGCTGGAGGCCACCACGTCACGGCGAGCGTCGTAGGTCGCGCTTTGATGCAGATTGAAGCTGCGCCCCGTGGATGGAATGAATTGCCACAAACCTGCCGCAGCGGCCGGAGAGTTGGCCATGGGGTTATAAGAGCTTTCGATCATCGGCAGCAGTGCCAGCTCCAGCGGCATGTTGCGCTCGTCCAGGCGCTCGACAATAAAATGCAGATAAGGGCTGGCCCGGACACTGGCTCCCGTGATAAATCCGCGATTGCTCAGCAACCAGTCGCGCTGGCGAGCGATACGCTCATTCATGCCTTGGCCATCGACCAGCCTGCAGCGCTGGGCAACCCGCTGCCACACGTCCTCGCCGTTATAAACAGGCAGATCGGAGATTTTGTCTGCAGCCCGCGAACCTTCCTTATCATCTCCCCCCCAATAGACCAGCCCCGACACCAGCCGCGGCGGACGGTCCTGACGCGGCGGCGAATAGTCCACAGACTGGCAGCCCACACACAAGGCGCCCATAGCGAGGACTGCGATTTGAACAGCGCGAGCCAGCAAGCGTGGGCTCGAT
Protein sequence:
MPAVAFPVSSPRLLARAVQIAVLAMGALCVGCQSVDYSPPRQDRPPRLVSGLVYWGGDDKEGSRAADKISDLPVYNGEDVWQRVAQRCRLVDGQGMNERIARQRDWLLSNRGFITGASVRASPYLHFIVERLDERNMPLELALLPMIESSYNPMANSPAAAAGLWQFIPSTGRSFNLHQSATYDARRDVVASSKAAMDYLTRLHDQFNNDWLLALAAYNAGEGTVGRAIEANRRRGLPVDYWNLNLPKETQDYVPRLLALSMVVRNPNAYGVKLTPVANTPYFDVVELNHAVDLTQLAATAGVDEGQLLRLNSAFLRKKTFDGPGRLLIPKTQNRVLTTSIARITGESPVTASIPLVTPSAIVKRAAERLPAPAPVAERPVRVAERPPLPKPVQSAQLAENLPSPKTAQPLPVAQQPTAPEALQPAPAAESAPAVEIAQSAPVVEPDPLTNRIQLPRIRDDRSSPRKRDDDEYRSGPRELPTGPRVVVFASDPRQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 54150.8 | 495 | 9.27 | -0.312 | 49.29 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR023346,IPR010511,IPR000189,IPR008258
Pfam: PF06474,PF01464
SMART:
KEGG:
PRINTS: