Effector profile
PlantPEAD ID: PlantPEAD00141 Uniprot ID: Q4UQD0 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 339 Pathogen type: Bacteria
Species: Xanthomonas campestris Strain: pv. campestris strain 8004 Other name:
Gene name: XC_3703 NCBI Gene ID: CP000050
Entry name: Y3703_XANC8 Protein name: UPF0234 protein XC_3703
DOI: 10.1371/journal.ppat.1004429.
Gene/Protein information
Gene sequence:
ATGCCGTCCTTCGACGTGATTTCCGAAGTCGACAAGCACGAACTGACCAATGCGGTGGATCAGGCCAACCGCGAGCTGGACACCCGCTTCGACTTCAAGGGCGTGGAAGCCAAGTTCGAACTGGAAGACGGCAAGGTGATCAACCAGTCCGCGCCCAGCGATTTCCAGGTCAAGCAGATGACCGACATCCTGCGCGCGCGCCTGCTGGCCCGTGGCATCGATGTGCGCTGCCTGGAGTTTGGCGATGTGGAGACCAACCTGGCCGGTGCGCGGCAGAAGGTCACCGTCAAGCAGGGCATCGAGCAGAAGCAGGCCAAGCAGCTGGTGGCCAAGTTGAAGGAAGCCAAGCTCAAGGTCGAAGCGCAGATCAACGGCGACAAGCTGCGCGTCACCGGCAAGAAGCGCGACGACCTGCAGGACGCGATCGCAGTATTGAAGAAGGCCGACTTCGAGCTGCCGCTGCAGTTCGACAATTTCCGCGATTGA
Protein sequence:
MPSFDVISEVDKHELTNAVDQANRELDTRFDFKGVEAKFELEDGKVINQSAPSDFQVKQMTDILRARLLARGIDVRCLEFGDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIAVLKKADFELPLQFDNFRD
Protein structure:
PDB(X-ray)(5B7W)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18201.8 161 5.96 -0.551 25.52
Plant infestation information
Experimental plant: Raphanus sativus (related: radish)
Susceptible plant: Brassica napus, Arabidopsis thaliana Disease name: Black rot
Host classification: Eudicots NCBI Species: 3708, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.