Effector profile
| PlantPEAD ID: PlantPEAD00147 | Uniprot ID: R4TJS0 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 347 | Pathogen type: Bacteria |
| Species: Xanthomonas oryzae | Strain: pv. oryzae strain BXO1 | Other name: |
| Gene name: XopQ | NCBI Gene ID: KC479821 | |
| Entry name: R4TJS0_XANOO | Protein name: Type III effector protein | |
| DOI: 10.1371/journal.pone.0075867，10.1111/mpp.13184 | ||
Gene/Protein information
Gene sequence:
TTGACGCCTGCCCAGCGCAGCATGCTGGCCGAGCTCGGCGTCGCCGACACGCCCGTGCTGACGCCCACCGAGGCGGCAGTATTGCGGGAGCTGCGTCTGCATCGGCCGCAGTTGCCGCTCGACACGCTGCTGTTCACCGACCCGAACAAGGACCCCGACGATGTCGTGACCTACACCATCGCCAAGCAGCTGCAGGCCGATGGCTTCTTGCGTCTGACCGACGTCGTCGTCACCCTGGGCGATGCCGACATGCGATCGCAACGCGCGCAGCTGGCAAAAGGTGTCTTCGATCGCCTGGCATTGCCGGATGTGCGCGTCGCGCGCGGCCAGGACTACCCCATGACGTCCACGCAGGCCCGAGAGCATTCCAAGTTCCTCGCCGAGGGAGCGGCGCTGCGTGCGGCGCCGGACGCGGTGCACACCGATGGCGTCCGTGCGATGTGCGAGCGCCTGGCGACCTCGCCCCACAAGCTCGGCATGGTGGTCATCGCCGGAATGACCGATGCCAGCGCCCTGCTTGCCGAGGCGGGCGATCTGGTGCGGGAAAAGGTCGCCTCCATCACCATCATGGGAGGCATCGACCCGGCCAGGGACGCCGATGGTCTCGTGCAACCGGACACGCGCGCCTACAACAACGCCACCGACATCCACGCCGCCCGTGCGCTCTACCGCCGCGCGCAGCAACTCGGCATTCCTCTGCGCATCCTGACCAAGGAGGCTGCCTACAAGGCCGCCGTACCGCCAGCCTTTTACGAAGGCATCGCACGCAATGGCCACCCTGTGGGCGAGTACCTGCGCGATGTCCAGAAAAACGCCTTGAAAGGCCTGTGGGAAGGCATCCAGGCCAACCTGATCCCCGGCCTGGATACGGCGTGGTTCTTCCGTACGTTCGTCGCAGCACAACCGCAGGATCCAGTGGCAGCGGATCAGCAAGGTGCCCTGAGCTTCGACGCCATCTGGCCGCAGGTAACCAAGCTCAATCTCTACGATCCGCTGACCCTGCTGGCAGCGCTCCCCGGCACCGCGCGTCTGCTGTTCCAGCCAACCCCCCTGCACCGCGAGGGAGCCAGCCCGGTCGAGCACGTGGGCCACGCCGAGGTTGTGCGTCCGGAAAAAGCCAGGCTGTTGCTGTCGGCACTGGCCAAGGCCGCGCTCGTCCAGCAGGACGAGGGGGAACATGCGCGCTGA
Protein sequence:
LTPAQRSMLAELGVADTPVLTPTEAAVLRELRLHRPQLPLDTLLFTDPNKDPDDVVTYTIAKQLQADGFLRLTDVVVTLGDADMRSQRAQLAKGVFDRLALPDVRVARGQDYPMTSTQAREHSKFLAEGAALRAAPDAVHTDGVRAMCERLATSPHKLGMVVIAGMTDASALLAEAGDLVREKVASITIMGGIDPARDADGLVQPDTRAYNNATDIHAARALYRRAQQLGIPLRILTKEAAYKAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIPGLDTAWFFRTFVAAQPQDPVAADQQGALSFDAIWPQVTKLNLYDPLTLLAALPGTARLLFQPTPLHREGASPVEHVGHAEVVRPEKARLLLSALAKAALVQQDEGEHAR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42766.9 | 395 | 6.09 | -0.122 | 29.37 |
Plant infestation information
| Experimental plant: Oryza sativa (related: rice) | |
| Susceptible plant: Oryza sativa | Disease name: Rice bacterial leaf blight |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001910,IPR036452
Pfam: PF01156
SMART:
KEGG:
PRINTS: