Effector profile
PlantPEAD ID: PlantPEAD00149 | Uniprot ID: A0A0Q0CNN4 | Source: Article |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
Species: Pseudomonas syringae | Strain: pv. tomato strain DC3000 | Other name: |
Gene name: AvrPpiG1 | NCBI Gene ID: LJRQ01000379 | |
Entry name: A0A0Q0CNN4_PSEA0 | Protein name: AvrPpiG1 protein | |
DOI: 10.1073/pnas.112183899 |
Gene/Protein information
Gene sequence:
ATGGGAATTTGCGTTTCCAAACCTAGCGTCCGGCATGACTACAACGAGGATTATGGGAGAAATTATGGCGCTGATACCGCCCAAGCCTCTTCGAACACTTCAAGTTCCGACAGCGAATGGGAGCAATCCCCTCCGCACTCGCCTAGGCAACCTGTAGCTGCTGACATACCCGATAGAGCCAAGGACAAGATTTCGGCGCTACGCGAGTCGTACTACAGATCACAGATGAATTCAAATCCGGATCTCTTGCATTATGCAAAAAACATACTCGACAACATAGAATACCGACAGTCCAACATTGATACACTTCAACTTGACGCTCAAAACCTAGGTTCGCTTGCTGCAGCTTATAATACAAGCTTCTCACAACTTAACCTTCATTGTTTCGACTCGCGCATCGCATTCCTAGATCATCTGCAAAGTCATAATGAGCCAGGCGCGTGGCGTGGTGTTTTTCGGCTAAATCCGCCCTCACTTCATCATGTCGCTGTGGACGTACGTAACCACTCCAATGGTCAAAAGACGCTGATCGTATTGGAGCCCATTACCGCCTATAAGGATGATGTTTACCCTCCTGCCTACTTACCGGGTTATCCTCAACTGCGCGAGGAGGTCAATACGCGATTTCGAGGAAATGCTAAAATGTCTGTCATAGAGACTGATGCACAACGTTCATGGCACGACTGTGTCATATTTTCGCTTAACTTTGCTTTGTGCTCCTACCAAAAAGATAGTGCCTTTGATAGCCTTCATGAAAAATTGGCTGAAAGTGGCTATTGTTTTCCAGGAAATGAAGATAGCCGATCGCGACTTGCCAGAGGCATAGAATTGATTGACGGAAAGCAAGTGCTGCCTGCCGTATTTTATAAACATGCGCATTCCCGAGGGACAGTGACTGCCGTAGAGAACGCTCAGCCCCACATAGCAAACGACAATGTCAGCACAAATCGGTCATCGTCCAGAGAAACGTTAAATGAACGTGCTGAGGCATTCCGCGTCCATCGGGAGGGGGGAGATCCAGAAAACTACAGTATGTCTATCGAGTCGTCCCGGGCGCGAAAGATAAGGAAAGCCCTAGAGAGCCAATAA
Protein sequence:
MGICVSKPSVRHDYNEDYGRNYGADTAQASSNTSSSDSEWEQSPPHSPRQPVAADIPDRAKDKISALRESYYRSQMNSNPDLLHYAKNILDNIEYRQSNIDTLQLDAQNLGSLAAAYNTSFSQLNLHCFDSRIAFLDHLQSHNEPGAWRGVFRLNPPSLHHVAVDVRNHSNGQKTLIVLEPITAYKDDVYPPAYLPGYPQLREEVNTRFRGNAKMSVIETDAQRSWHDCVIFSLNFALCSYQKDSAFDSLHEKLAESGYCFPGNEDSRSRLARGIELIDGKQVLPAVFYKHAHSRGTVTAVENAQPHIANDNVSTNRSSSRETLNERAEAFRVHREGGDPENYSMSIESSRARKIRKALESQ
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
40758.9 | 362 | 6.2 | -0.739 | 58.66 |
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress) | |
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR005083
Pfam: PF03421
SMART:
KEGG:
PRINTS: