Effector profile
| PlantPEAD ID: PlantPEAD00157 | Uniprot ID: D0N6D2 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: SFI3 | NCBI Gene ID: XM_002998231 | |
| Entry name: SFI3_PHYIT | Protein name: RxLR effector protein SFI3 | |
| DOI: 10.1111/nph.15635 | ||
Gene/Protein information
Gene sequence:
ATGCGCTTCCTTCTCGTCGCTGTGGTGGCAATGATGGCCCTCGTTTCCAGCTCCACTGCTGCGGTCGCTGAGACGTCAAATGACATCAACACGATGAACAACAACCAGGAATTTGCTCGATCTCTGCGCAACACGGAGGAGCGCTCGATTGCGGCAATTCTCGCCGAAGCGGGTGAAGAGGACCGCGCAGCGTGGAGGATCAATTATCGTGCCTGGTACAAGGCTAAGCTGACGCCGACGCAAGTCAAGACGGTGCTGGGCGTCTCCCAAGCAGAGATGAATAATGTTGCGAAGCAACTCCAGCGACTATACCTCGGCTACTACTCCTTCTACACGGCGATGGAGAAGAAGAAAGAAGAGAAGAAGAGGCTGGCCACACCTTGA
Protein sequence:
MRFLLVAVVAMMALVSSSTAAVAETSNDINTMNNNQEFARSLRNTEERSIAAILAEAGEEDRAAWRINYRAWYKAKLTPTQVKTVLGVSQAEMNNVAKQLQRLYLGYYSFYTAMEKKKEEKKRLATP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14387.5 | 127 | 9.56 | -0.356 | 40.46 |
Plant infestation information
| Experimental plant: Solanum tuberosum (related: potato), Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: pif:PITG_06087
PRINTS: