Effector profile
| PlantPEAD ID: PlantPEAD00158 | Uniprot ID: D0NCC1 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: strain T30-4 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: SFI4 | NCBI Gene ID: XM_002903165 | |
| Entry name: SFI4_PHYIT | Protein name: RxLR effector protein SFI4 | |
| DOI: 10.1371/journal.ppat.1004057 | ||
Gene/Protein information
Gene sequence:
ATGCGAGTACTGCGCGTGACGTTCCTATGGGCGCTGCTGCTCTTAGTCGCCTTTAGTGCCTCCGTCTACGCTGCTGAAGACGAACCTAAGACTCCGGAGTCCACATCTAGCGCGAACCCGCGTGACAATGACCCCGTTATCCAAGAGATCCGTGGATTACGGAACTCTGGCATGAAGCTGAACGACGCCAAGGACTTTAAAGGCGCCATCGCGAAGCTACGTGGGGCTATTACACTGCTACACGACCGAGTGTTTGGTGAAGGACGTGAGGCCATCACCGACCCCAGCGACATCTCGCAGGACGCGGCTCTCTACGCCCAGATCCTCAACGACTACGGCACGGTACTTATCCGTGCCAAGCAATACGACGAGGCCATCGAAGTGCTGGAGGACTCGGTAGCGATGGTAGAGAAGATCTACGGAGACAGCCACCCGTCGCTCGGTCTGTCGCTGCGTAGCTTGGCCGACGCATACATGGCCAAGGAGGAGTACAAGATGGCCATTAAAAAGTACAAAACCCTCCGCAAACATGTCAAAAAGGGCCTGGAAACGACCCACGAAGCGTACATTGAGGCGTCGTTGAGGATTGCCGAGGGGTACAAGAAACTGGGCAATACAAAGAAGAACTTAAAGGTGCTAAAGGACGCCGTGGAGGCTCAAAACGGAGAGATCAATGGCCTGACGACGGGCATCGCCGAGCTCTACATGGAGCTGTCGACGGCTCACGTGGCTGTGGGCGAGATCGATGACGCTCTGAGAGCCGCGGAGGTTGCAAGTGCGATCTTCCGGCAACGTGACGGCGAGGACACGCTGTCGTTTGCGTTCAGCTTGAATGCTCTGGCCGGCGTCAAGATGCGCCAGAAGAAGGTGGACGAGGCCATTAAGTTGCTGGAACAGGCCCACAGAATTGCTGTGCAGATCTACGGCGAGAAGGACCCAATCACTCAAGCTAGCGCAAAGACTCTACGAGAGGTGAAGGAGTACAAACTCGACTTGCAGGCGCAGAAGGACGAGCTGTAG
Protein sequence:
MRVLRVTFLWALLLLVAFSASVYAAEDEPKTPESTSSANPRDNDPVIQEIRGLRNSGMKLNDAKDFKGAIAKLRGAITLLHDRVFGEGREAITDPSDISQDAALYAQILNDYGTVLIRAKQYDEAIEVLEDSVAMVEKIYGDSHPSLGLSLRSLADAYMAKEEYKMAIKKYKTLRKHVKKGLETTHEAYIEASLRIAEGYKKLGNTKKNLKVLKDAVEAQNGEINGLTTGIAELYMELSTAHVAVGEIDDALRAAEVASAIFRQRDGEDTLSFAFSLNALAGVKMRQKKVDEAIKLLEQAHRIAVQIYGEKDPITQASAKTLREVKEYKLDLQAQKDEL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37574.9 | 339 | 5.98 | -0.313 | 28.24 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato), Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Solanum lycopersicum, Solanum tuberosum | Disease name: Late blight |
| Host classification: Eudicots | NCBI Species: 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011990,IPR019734
Pfam: PF13374,PF13424
SMART: SM00028
KEGG: pif:PITG_09585
PRINTS: