Effector profile
| PlantPEAD ID: PlantPEAD00168 | Uniprot ID: G7TAA8 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 347 | Pathogen type: Bacteria |
| Species: Xanthomonas oryzae | Strain: pv. oryzicola strain BLS256 | Other name: |
| Gene name: XopA(hpa1) | NCBI Gene ID: CP003057 | |
| Entry name: G7TAA8_XANOB | Protein name: Harpin-like protein Hpa1 (XopA) | |
| DOI: 10.1094/MPMI-10-14-0314-R; 10.1186/s12866-018-1251-3 | ||
Gene/Protein information
Gene sequence:
ATGAATTCTTTGAACACACAATTCGGCGGCAGCGCGTCCAACTTCCAGGTTGACCAAAGCCAGAACGCGCAATCCGATTCGAGCCAGGGCAGCAATGGCAGCCAGGGTATCTCGGAAAAGCAACTGGACCAGTTGCTGTGCCAGCTCATCCAGGCCCTGCTTCAGCCGAACAAAAATGCTGAGGAAGGTAAGGGTCAGCAGGGTGGCGAGAATGGCGGTGGCCAGGGCGGCAATCAGCAGGCCGGGAAGGAGAATGGCGCCTCGCCACTCACCCAGATGCTGATGAATATCGTCGGAGAGATTCTCCAGGCGCAGAATGGTGGTGGTGCCGGTGGTGCCGGCGGCAGCAGCGGCGGCGACTTTGGTGGCAGTTTCGCCAGCAGCTTCTCGAACGACAGCGGATCGATGCAGTAA
Protein sequence:
MNSLNTQFGGSASNFQVDQSQNAQSDSSQGSNGSQGISEKQLDQLLCQLIQALLQPNKNAEEGKGQQGGENGGGQGGNQQAGKENGASPLTQMLMNIVGEILQAQNGGGAGGAGGSSGGDFGGSFASSFSNDSGSMQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13617.5 | 137 | 4.06 | -0.715 | 44.04 |
Plant infestation information
| Experimental plant: Oryza sativa (related: rice) | |
| Susceptible plant: Oryza sativa | Disease name: Rice bacterial leaf streak |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048214
Pfam:
SMART:
KEGG: xor:XOC_4432
PRINTS: