Effector profile
| PlantPEAD ID: PlantPEAD00171 | Uniprot ID: G7TAD0 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 347 | Pathogen type: Bacteria |
| Species: Xanthomonas oryzae | Strain: pv. oryzicola strain BLS256 | Other name: |
| Gene name: XopF1 | NCBI Gene ID: CP003057 | |
| Entry name: G7TAD0_XANOB | Protein name: Type III effector protein XopF1 | |
| DOI: 10.1094/MPMI-10-14-0314-R | ||
Gene/Protein information
Gene sequence:
ATGAAACGCTCCGGCGATATCGGGGCCGCTTCCAGTAGCCGCGCAGCCTCGCACTCTCCTTTACAACCAACGCAGCCCGAAGGCGTTGCTCCCCCGCGGGAAGAACACGCAGATTTCATGCCGACTGGACCGCTTTTGGGCTTGCCCTCTTCCAGCGCGGCGCTGCGCAGTCGTCGCACATCTTTGAGCGGTCGCGCCAAGCCTCATGCAGATTACACCGAGGAGGTCATGTCCCAAGTCCAGGAAATCAACGAACCGGCTGGACCTGCCGCCGCGGCGACCTATGCCGAGCGCAGCACGGCGGCGGCCGCCAAGGTGAAAGCGCAGCTACGCGCCCGCCTGGACGCTCTGCCATTTGCTGCGCCCTCGAAAGAGCAGACCGCCCTGCAGGCCGCCTATCTGCAATGGGCTGACGCACGCGTGCAGGAACGCATCACTGCCTTCGGGCCGGATGCCGGGTACCAGGCCGTCGGTGACATGAAGACAGCGGGCATAAAAGCGGCATTGCCGATTGCCTACCAATGTCTACGGTCGTTCATTCTCGGTGCGATGCGTAATCCGGTCGGTCTGGCCACGGGTGCAGCCTATGCGGCCCGGCGCCCGGTTGACGCGGAGGAGCTGAGTACGGTGATGGTGTCGGGTATCGCGGCGGGGTCGGCGTCCTATACCAGCGATACTTTGTTGATCCCGGCAATGGACCGGCGCACGCGCGTTGCCAACATGCCGAAGTTTCAGGCCGTCGACCCCAAAATCCTGGAGCCAGATCCACCACCGGTCATTCTGGAAGTGACCGCTGAAGGCAAGCGCTTCACGCGTCTGGGCGATGACGATGCGCCGACGCTTGCCGAACTCAAGGCCCAGACCTACGACCGCCGCCTGGTGATCACGCAGCGCCAATCGAACCTGGACGACAAGTCACTCAATACCTTGTTGCTCAAGCCAGTGATCAACGCAATATTCAATGCCGCGCGCCGGACTGGTGGTAATCCGGATTTGCTGACGCCTGCCGGCCAGCTGGGGTTGAGCGCACTCGCCATTGGCGGCGCCGGGGTCGTTCAAAAGGCATTGCTTGAGACAGGCAAAGCTGTGCCCCGGACCGGCCAAACGAGTGTCCCGGACCTAGTTGGCGGAGAGCAACGGCTGAATCTGTTCGCATTGGCGTTGCCCGACAAAGAGCGCCGGCCTGCACAATGGTCCGACGCCGTGCATTTCCCGCCTAAATATTTGCTGGACACCGGAAAGGAAGCGTTGGCGTTGGCAAGGCAGGGCGTCAACAGCGCAAACGCGATCGCCACCACGGTACGCGACCTGTTGACCCGCCACATGCTGAGCAATGTCATTTCCAGCTTCGCCTCGATTGGGGCTGCGCGCATCATCGCAGCGCCGTTGCGTGGGGGGAGCCACAGACCTGTTGCTGGCGAAGCTGCCAATTCCACGGCTGTGGTCGCGCAGCAGGCCGTGCAAACCATGTTCAACGATACGTTATGGAATGCGCTCAAGGCCAAGAATGGCACCAATACCTCCCAGGCGGCGCGCCTGGACAACGAAGGTGCCGCGCTTGCAGCCGAGTATAAACGTACCATCAAACAAACAATCGAGGCCCTGGCCGAGCCCGTGGACCAGGCGATCGCCAGGCTTTCGGATCAGACACGTGCCATGGAGGAGGGGATGCGCGTCGCGCCTGGCGCTTGGCTGCGTGGCCATGCACTGCGTACCGCCCTGCAGACATTGCTTAAAGAGATCGGCACGCAGTCCGTCTCGATCGCGACCATCGATGCGGTACGTACTGCACTGCGCGAGAAGGGGGGGCAAACGTCTAGAGCCGTACCCCCCGACGCGGCCACGCAGGCACTGGATGGTCAGCTGCAAACGCTCAAGCGTGCACTGCATGACAGCGAAGAACTTCGCCAGTGGCAAAGCGGGCGAGCATGA
Protein sequence:
MKRSGDIGAASSSRAASHSPLQPTQPEGVAPPREEHADFMPTGPLLGLPSSSAALRSRRTSLSGRAKPHADYTEEVMSQVQEINEPAGPAAAATYAERSTAAAAKVKAQLRARLDALPFAAPSKEQTALQAAYLQWADARVQERITAFGPDAGYQAVGDMKTAGIKAALPIAYQCLRSFILGAMRNPVGLATGAAYAARRPVDAEELSTVMVSGIAAGSASYTSDTLLIPAMDRRTRVANMPKFQAVDPKILEPDPPPVILEVTAEGKRFTRLGDDDAPTLAELKAQTYDRRLVITQRQSNLDDKSLNTLLLKPVINAIFNAARRTGGNPDLLTPAGQLGLSALAIGGAGVVQKALLETGKAVPRTGQTSVPDLVGGEQRLNLFALALPDKERRPAQWSDAVHFPPKYLLDTGKEALALARQGVNSANAIATTVRDLLTRHMLSNVISSFASIGAARIIAAPLRGGSHRPVAGEAANSTAVVAQQAVQTMFNDTLWNALKAKNGTNTSQAARLDNEGAALAAEYKRTIKQTIEALAEPVDQAIARLSDQTRAMEEGMRVAPGAWLRGHALRTALQTLLKEIGTQSVSIATIDAVRTALREKGGQTSRAVPPDAATQALDGQLQTLKRALHDSEELRQWQSGRA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 68155.4 | 643 | 9.54 | -0.242 | 45.57 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Oryza sativa | Disease name: Rice bacterial leaf streak |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: xor:XOC_4455
PRINTS: