Effector profile
| PlantPEAD ID: PlantPEAD00177 | Uniprot ID: F6MEZ1 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: RXLR3 | NCBI Gene ID: JF800118 | |
| Entry name: F6MEZ1_HYAAB | Protein name: RXLR effector | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGCGTCTTCACATCCTGCTCTTCACGCTATCGTCGTCGACAAGTCTCGCACTGACTGGCTCAACAACTATGGACCCATTTCACCCAAGTGTCGATACTCTCTTGGCTGCGGATCGCCACATCGGTGAGCGTGTTACTCGTCAGCGTCATCTACGGGAGGAGGTTGGGCCTGAGACTTTAAAAGTTGAACAGGTGACCGCAATGATCGCCAAGCATGAATCGGATCTAATGGCGCTTGCCGATTCTCTTGGTATGCATCCACTGAACTTTCTGGTGGCACTAAAAAAACGGAATCCAAAAAAAAAAGTGATACTTCTAGCTGATCAGTATCGAGAGCGCTGGAAAATCAAGAACGGGGACACGACTCCGAGCCGCCCGCATCGTTTCTGA
Protein sequence:
MRLHILLFTLSSSTSLALTGSTTMDPFHPSVDTLLAADRHIGERVTRQRHLREEVGPETLKVEQVTAMIAKHESDLMALADSLGMHPLNFLVALKKRNPKKKVILLADQYRERWKIKNGDTTPSRPHRF
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14677.1 | 129 | 9.98 | -0.388 | 38.53 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: