Effector profile
| PlantPEAD ID: PlantPEAD00185 | Uniprot ID: F6MF04 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: RXLR20 | NCBI Gene ID: JF800131 | |
| Entry name: F6MF04_HYAAB | Protein name: RXLR effector | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGAGACCTTGCTACCTCTTCGTGACCTTTCTGGGTGGGGCGCTACCTGCCGGTGTTGCTCCCGCCTCGGGACTCGCGAAACTAGGGGCTGCGACACAAGGTGCTCATGAACTCGAGGACGAGACATCAGGAAGACTTCTGAGGGTGCACACTTCTGCAAAGGAAGATCAAGAAGGTCGAATGATTCCTGGATCCGAGTTTTTTGAAAAGGCCCAGCCCGTCCTTCACAACTTGTCTATCAACATGCCGAACCTGGACGAAATCAAAGCGAATGCTGCCAGTTATTTTTACTTGTGTATGCGTGACGTGCTTCTGACAGAACAACAGCGTATCAAGGCATTTAACGATATGCGACGGAGAGCTGTGGTCGAGAGACTTCAAAGTATCCAGCCTATCGATTGGAACGTGGGGGCAGTCGATTGGCAGGCCATGCTCGCGTTGCAAAATCTTCTAGAGAACCGTGACATGTACTATCTGGCGATCTCACTGGCACTGGCAAAGCAGCCGTCAGTTCTCATACCGGAGCCGATTGCTAGAACGGCTAAGGAGATGGAATTGTCGCAATTCGGCTTGTGGGCATCGATGGAAAAGGTTCCCGAAGTAGTAAGAGAGCAACTTAAGAAGTTGCCCGACTTTGTTCAAGCCGCCGGTGATCATGCCCTCGTAAATGAGGTGGTACACAGCTACAAGCAGTTTTCCTCCGCTCTAATGCGTAAAAAAGCGTAA
Protein sequence:
MRPCYLFVTFLGGALPAGVAPASGLAKLGAATQGAHELEDETSGRLLRVHTSAKEDQEGRMIPGSEFFEKAQPVLHNLSINMPNLDEIKANAASYFYLCMRDVLLTEQQRIKAFNDMRRRAVVERLQSIQPIDWNVGAVDWQAMLALQNLLENRDMYYLAISLALAKQPSVLIPEPIARTAKEMELSQFGLWASMEKVPEVVREQLKKLPDFVQAAGDHALVNEVVHSYKQFSSALMRKKA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 26955.2 | 241 | 6.54 | -0.144 | 42.64 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: