Effector profile
| PlantPEAD ID: PlantPEAD00191 | Uniprot ID: B2C6F8 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: HaRxL96 | NCBI Gene ID: EU282490 | |
| Entry name: B2C6F8_9STRA | Protein name: RXL96 | |
| DOI: 10.1111/j.1365-313X.2012.05079.x | ||
Gene/Protein information
Gene sequence:
ATGCGGTTCGCCTTAATCACCCCCATGGTCCTGGCCTTTAGTTCGATCCTTATGTACGTCACGCATTCTAATGTGGTGGTAGCCACCTTCCAGGCTCAGCTTCGCTCGTCTACCGGCGACCTTAATGGCATCTCCCCCGCTCGTTTGTTAGGGTCGTACGCGTCCGTGGAAGAAGAAGAGAGAATGCCATTCGCGCTCAGCGCTATAACGGAGAAGATCAAGTCTTTCGTTGCAAAGTTCGTTGGCTTTTATCGAGCAAAAAAGTGGGCGATGAACGCCAAAAGCCGGGACGAGGTCCTGGACCGGTTTCATCCCAGTATAGCCGACATTGATAGTCCTTATCAGCTCGCCCAGAACTTCTGGGATCAGCTTTCACGATGGAATCTGGAGGCTCTGATGAGGTACTTTAAGACAATGAACCAAAAAGATCCTGAAAAGAGCGTCGTATTGGTTGAAGCTCTGTCAACGAAATACGGGGTCGTCCCTATGGCAGAGGTGTTACTTAAGGCTCGAGTCTCTGGCAATAAGTTTCGGGCGGCAGTGGCTACTGAGATGTTGGAGCATCAGCTTCAAAGTTGGTATGACAGCGGGAAAAACGTTGACGAAGTTTTTCGACTGCTGGACCTGCAGAGCGACAAAGACTTGGCATCACTGAGATTGCAGATGTTGCAAGATTATATTAATTACTTCAACAAAAAGAAAACGACGGAGCATACGCTGCTCGGAACGCTGATAAAAGGCTTTGGTAGTGAAGCTAAGCTAAGTCCGATCTTAGCGATGGCAAAGGCTTATCCCCCTCGCCCCGGAGATCTAGCAACGAGGTTGCAGGACGAAATGGTCAGTGGATGGGTCGCGCGTGGATCGTCTGTCGAAGCCGTCATTTCGTCGCTGCAGCTTAGCTCCGAACATTTTTTCCGGTATGAGTACAGGGATGCATTGACCACGTTCATCGAGAAGCTGTCACCTGCAAGAAGAAAGTCGGCAGATCTGAACAACGTTCTAAGACGATCCTACAACGATGACGGCAGATTCGCCAACGCGATCATGCGAGCAAAGCAGGACAAAGACACGGAGATGATAGCGCGCAGGATTGAGGAGTGGCTGTTCCAGCGGTGGTGGAAAGAATTCGGTAAAGATGAGGAAGATGTTATTGACAATATTATGGCAGGAGGGGATGTAAGTCTGGAGAGAGCGTCATTCATAGCGAAAAAGTTTGATACCTGGCACCCGCCCTCATCGTCATCGTAG
Protein sequence:
MRFALITPMVLAFSSILMYVTHSNVVVATFQAQLRSSTGDLNGISPARLLGSYASVEEEERMPFALSAITEKIKSFVAKFVGFYRAKKWAMNAKSRDEVLDRFHPSIADIDSPYQLAQNFWDQLSRWNLEALMRYFKTMNQKDPEKSVVLVEALSTKYGVVPMAEVLLKARVSGNKFRAAVATEMLEHQLQSWYDSGKNVDEVFRLLDLQSDKDLASLRLQMLQDYINYFNKKKTTEHTLLGTLIKGFGSEAKLSPILAMAKAYPPRPGDLATRLQDEMVSGWVARGSSVEAVISSLQLSSEHFFRYEYRDALTTFIEKLSPARRKSADLNNVLRRSYNDDGRFANAIMRAKQDKDTEMIARRIEEWLFQRWWKEFGKDEEDVIDNIMAGGDVSLERASFIAKKFDTWHPPSSSS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 47388.2 | 415 | 8.71 | -0.327 | 51.71 |
Plant infestation information
| Experimental plant: Glycine max (related: soybean) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: