Effector profile
| PlantPEAD ID: PlantPEAD00201 | Uniprot ID: G3C9U1 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 272952 | Pathogen type: Oomycota |
| Species: Hyaloperonospora arabidopsidis | Strain: strain Emoy2 | Other name: Peronospora arabidopsidis |
| Gene name: HaRxLL470b | NCBI Gene ID: HE574789 | |
| Entry name: G3C9U1_HYAAE | Protein name: RxLR effector candidate | |
| DOI: 10.1038/srep44598 | ||
Gene/Protein information
Gene sequence:
TACATCGCCAAGGACCCGCACCCGAAGCCCTCAGAAGCGACGTCACCTGCCAATGCACGTGACCAGGACCCTGTTATCCAAGAGGTGCGGGGACTTCGGAATGCCGGGATGAAGCTCAATGATACCAAGGACTTTCGAGGAGCTACTGGGAAACTACGAAAAGCCATCACGCTGCTGCACCACCGGGTGTTCGGAGAAGGTCGTCACGACGTGACGGATCCGCAGGATACTTCCCAAGATGCGGCTCTGTACTCGCAGCTTTTGAACGACTACGGGTCGGTGTTGATTCGAGGGGAGGAGTACGATGAAGCCATTGAAGTGCTGGAAGATTCTGTGGCAATGGTGCAGAAGATCTATGGAGACAGTCACCCTTCGCTTGGGTTGTCCTTGCGCAGTCTCGCGGATGCTTATATGGCCAAGAAGCAGTACCAGAAGGCTATTGGCAAGTACAAGACGCTTCGTAAACATGTCAAGAGAGGACTGGGTGTGACGCATGATCCGGAGGCGGTGACCCAGCTTTCTTGTACAAAGTGGTGA
Protein sequence:
YIAKDPHPKPSEATSPANARDQDPVIQEVRGLRNAGMKLNDTKDFRGATGKLRKAITLLHHRVFGEGRHDVTDPQDTSQDAALYSQLLNDYGSVLIRGEEYDEAIEVLEDSVAMVQKIYGDSHPSLGLSLRSLADAYMAKKQYQKAIGKYKTLRKHVKRGLGVTHDPEAVTQLSCTKW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19830.4 | 178 | 8.57 | -0.675 | 40.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Arabidopsis thaliana | Disease name: Downy mildew of Arabidopsis |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011990
Pfam: PF13424
SMART:
KEGG:
PRINTS: